RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 ZNF600Q6ZNG1 722 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 ZNF257Q9Y2Q1 563 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 PLSCR4Q9NRQ2 329 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 FABP5P3A8MUU1 101 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 NABP1Q96AH0 204 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 EPDR1Q9UM22 224 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 C7orf69Q9H7B7 122 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 PRR32B1ATL7 298 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 SUMO2P61956 95 aaKnown RBP17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 COLCA1Q6ZS62 124 aa17.53■□□□□ 0.4
SMARCA2-227ENST00000634760 OR10J3Q5JRS4 329 aa17.52■□□□□ 0.4
SMARCA2-227ENST00000634760 WFIKKN1Q96NZ8 548 aa17.52■□□□□ 0.4
SMARCA2-227ENST00000634760 NPFFR1Q9GZQ6 430 aa17.52■□□□□ 0.4
SMARCA2-227ENST00000634760 NINQ8N4C6 2090 aa17.52■□□□□ 0.4
SMARCA2-227ENST00000634760 GGNQ86UU5 652 aa17.52■□□□□ 0.4
SMARCA2-227ENST00000634760 RNF5Q99942 180 aa17.52■□□□□ 0.4
SMARCA2-227ENST00000634760 M0R381 172 aa17.52■□□□□ 0.39
SMARCA2-227ENST00000634760 RNF125Q96EQ8 232 aa17.52■□□□□ 0.39
SMARCA2-227ENST00000634760 RNASE4P34096 147 aaKnown RBP17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 PINLYPA6NC86 204 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 LINC01549A6NIU2 74 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 C9JCJ5 164 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 VDAC2P45880 294 aaPredicted RBP17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 JMJD8Q96S16 334 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 VCX2Q9H322 139 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 CASP8AP2Q9UKL3 1982 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 CLPSP04118 112 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 TMEM242Q9NWH2 141 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 TMEM170BQ5T4T1 132 aa17.51■□□□□ 0.39
SMARCA2-227ENST00000634760 ATP5L2Q7Z4Y8 100 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 PRSS22Q9GZN4 317 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 CHD5Q8TDI0 1954 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 DNAL4O96015 105 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 URB1O60287 2271 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 TRBV6-6A0A0A6YYG2 114 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 PPBPP02775 128 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 C8orf46Q8TAG6 207 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 GNB1LQ9BYB4 327 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 IGHV1-46P01743 117 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 CD59P13987 128 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 CCL3L1P16619 93 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 LHFPL1Q86WI0 220 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 WDR83OSQ9Y284 106 aa17.5■□□□□ 0.39
SMARCA2-227ENST00000634760 IGHV3-66A0A0C4DH42 116 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 HIGD1CA8MV81 97 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 FOXA3P55318 350 aaPredicted RBP17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 ATG2BQ96BY7 2078 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 OOSP1A8MZH6 123 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 LDLRAD4O15165 306 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 FOXC2Q99958 501 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 LINC01559Q495D7 138 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 ATOH7Q8N100 152 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 LOC102724200A0A096LPH7 203 aaPredicted RBP17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 OR9G9P0C7N8 305 aa17.49■□□□□ 0.39
SMARCA2-227ENST00000634760 RAMP3O60896 148 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 TRAV21A0A0B4J279 112 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 MRAP2Q96G30 205 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 CCDC88CQ9P219 2028 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 TMEM262E9PQX1 116 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 GCSAMLQ5JQS6 135 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 ZNF319Q9P2F9 582 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 DOCK4Q8N1I0 1966 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 IGHV3-35A0A0C4DH35 117 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 OVOL1O14753 267 aa17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 CHCHD1Q96BP2 118 aaKnown RBP17.48■□□□□ 0.39
SMARCA2-227ENST00000634760 TRAV1-1A0A0B4J248 108 aa17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 CTAG1AP78358 180 aa17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 SRRM5B3KS81 715 aa17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 IGKV3-20P01619 116 aa17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 TMEM167AQ8TBQ9 72 aa17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 ITLN2Q8WWU7 325 aaPredicted RBP17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 LINC01587Q99440 93 aa17.47■□□□□ 0.39
SMARCA2-227ENST00000634760 CMC4P56277 68 aaPredicted RBP17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 ST20Q9HBF5 79 aa17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 MRPL16Q9NX20 251 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 ZNF418Q8TF45 676 aaPredicted RBP17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 TRGV11A0A075B6L2 103 aa17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 F2Z2F3 143 aa17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 NXT2Q9NPJ8 142 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 JKAMPQ9P055 326 aa17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 SMAD7O15105 426 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 EFNB3Q15768 340 aa17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 WFDC1Q9HC57 220 aa17.46■□□□□ 0.39
SMARCA2-227ENST00000634760 MST1P26927 711 aa17.46■□□□□ 0.38
SMARCA2-227ENST00000634760 TTC32Q5I0X7 151 aa17.46■□□□□ 0.38
SMARCA2-227ENST00000634760 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 H0YIZ8 118 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 SRSF1Q07955 248 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 S4R3C0 116 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 IGHV3OR16-13A0A075B7E8 117 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 IGHV3-74A0A0B4J1X5 117 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 TRAV8-6A0A0B4J262 113 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 ADMP35318 185 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 PLAURQ03405 335 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 RPUSD1Q9UJJ7 312 aaKnown RBP17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 PSG8Q9UQ74 426 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 MINOS1Q5TGZ0 78 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 MINOS1-NBL1R4GNA1 71 aa17.45■□□□□ 0.38
SMARCA2-227ENST00000634760 EFNA2O43921 213 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms