RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 ST8SIA3O43173 380 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 SCGNO76038 276 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 PHLDA2Q53GA4 152 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 THOC7Q6I9Y2 204 aaKnown RBP9.31□□□□□ -0.92
LINC00339-206ENST00000634451 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-206ENST00000634451 OR1P1Q8NH06 330 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 MOB3AQ96BX8 217 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 VSIRQ9H7M9 311 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
LINC00339-206ENST00000634451 CYB5BO43169 146 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 MRPS14O60783 128 aaKnown RBP9.3□□□□□ -0.92
LINC00339-206ENST00000634451 FGF2P09038 288 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 PPP5CP53041 499 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 MFAP4P55083 255 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 RELQ04864 619 aaPredicted RBP9.3□□□□□ -0.92
LINC00339-206ENST00000634451 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
LINC00339-206ENST00000634451 TPRA1Q86W33 373 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
LINC00339-206ENST00000634451 HSPG2P98160 4391 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 LOC100506127A0A0U1RQW1 187 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 SNAPC5O75971 98 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 HSPA13P48723 471 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
LINC00339-206ENST00000634451 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 ANAPC10Q9UM13 185 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 SSR3Q9UNL2 185 aa9.29□□□□□ -0.92
LINC00339-206ENST00000634451 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00339-206ENST00000634451 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 DNASE2O00115 360 aaPredicted RBP9.28□□□□□ -0.92
LINC00339-206ENST00000634451 GNG7O60262 68 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 ZNF688P0C7X2 276 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 MLANAQ16655 118 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 DHRS11Q6UWP2 260 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 STXBP6Q8NFX7 210 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 MRGPRFQ96AM1 343 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 SEC22AQ96IW7 307 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 TMEM56Q96MV1 263 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 CMTM3Q96MX0 182 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 IFT46Q9NQC8 304 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 BLOC1S6Q9UL45 172 aa9.28□□□□□ -0.92
LINC00339-206ENST00000634451 TRAV10A0A0B4J240 114 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 PRSS29PA6NIE9 313 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 K7EQG2 157 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 GPR31O00270 319 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 TCTAP57738 103 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 GABARAPL2P60520 117 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 GSG1LQ6UXU4 331 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 LYSMD2Q8IV50 215 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 STHQ8IWL8 128 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 TSPAN14Q8NG11 270 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 HRH4Q9H3N8 390 aa9.27□□□□□ -0.93
LINC00339-206ENST00000634451 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-206ENST00000634451 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 HLA-DMAP28067 261 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 HRH1P35367 487 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-206ENST00000634451 TAS2R20P59543 309 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 TBC1D26Q86UD7 250 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 OR5H2Q8NGV7 314 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 TXN2Q99757 166 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 FNDC4Q9H6D8 234 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-206ENST00000634451 DIABLOQ9NR28 239 aa9.26□□□□□ -0.93
LINC00339-206ENST00000634451 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 TMEM50AO95807 157 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 EIF4EP06730 217 aaKnown RBP9.25□□□□□ -0.93
LINC00339-206ENST00000634451 CBX5P45973 191 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 DEFB1P60022 68 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 PAFAH1B2P68402 229 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 ZNF600Q6ZNG1 722 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 DCANP1Q8TF63 244 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
LINC00339-206ENST00000634451 DEFB131BA0A096LNP1 70 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 A0A0A6YYH2 397 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 A6NJ64 397 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 IGKV1-5P01602 117 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 MIFP14174 115 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 NAT1P18440 290 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 PI3P19957 117 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 P2RY1P47900 373 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 SCAND1P57086 179 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 HSPE1P61604 102 aaKnown RBP9.24□□□□□ -0.93
LINC00339-206ENST00000634451 PVRIGQ6DKI7 326 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 H2BFWTQ7Z2G1 175 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 CADM3Q8N126 398 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 FKBP11Q9NYL4 201 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 TBC1D24Q9ULP9 559 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 NACAE9PAV3 2078 aa9.24□□□□□ -0.93
LINC00339-206ENST00000634451 TRAV2A0A0B4J234 112 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms