RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 KIF26BQ2KJY2 2108 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 CENPVL1A0A0U1RR11 272 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 H2BFSP57053 126 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 ZNF826PQ6ZT77 177 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 NPIPB11E5RHQ5 1161 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 CD28P10747 220 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 ICAM4Q14773 271 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 RFLNBQ8N5W9 214 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 C1QTNF4Q9BXJ3 329 aa9.66□□□□□ -0.86
SRSF4-208ENST00000634348 POLR2AP24928 1970 aaKnown RBP9.66□□□□□ -0.86
SRSF4-208ENST00000634348 hCG_38984A0A1B0GV85 526 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 CCL1P22362 96 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 LY6EQ16553 131 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.65□□□□□ -0.86
SRSF4-208ENST00000634348 TIAM2Q8IVF5 1701 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 K7EP13 123 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 HMGA2P52926 109 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 IFITM3Q01628 133 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 C1orf174Q8IYL3 243 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 NABP1Q96AH0 204 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 UNC119Q13432 240 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 FGFRL1Q8N441 504 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 RCC1LQ96I51 464 aaKnown RBP9.65□□□□□ -0.86
SRSF4-208ENST00000634348 SRSF8Q9BRL6 282 aaKnown RBP9.65□□□□□ -0.86
SRSF4-208ENST00000634348 C1QL4Q86Z23 238 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 DTX4Q9Y2E6 619 aa9.65□□□□□ -0.86
SRSF4-208ENST00000634348 MRPS18BQ9Y676 258 aaKnown RBP9.65□□□□□ -0.86
SRSF4-208ENST00000634348 TMEM243Q9BU79 118 aa9.65□□□□□ -0.87
SRSF4-208ENST00000634348 STARD6P59095 220 aa9.65□□□□□ -0.87
SRSF4-208ENST00000634348 PRADC1Q9BSG0 188 aa9.65□□□□□ -0.87
SRSF4-208ENST00000634348 LSM6P62312 80 aaKnown RBP9.64□□□□□ -0.87
SRSF4-208ENST00000634348 GPBAR1Q8TDU6 330 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 MYO7BQ6PIF6 2116 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 PRSS23O95084 383 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 HAMPP81172 84 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 SAXO1Q8IYX7 474 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 A0A1W2PRE2 83 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 SRD5A1P18405 259 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
SRSF4-208ENST00000634348 FOXL1Q12952 345 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 LAGE3Q14657 143 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 SCTP09683 121 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 CISD3P0C7P0 127 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 PAX1P15863 534 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 SSC4DQ8WTU2 575 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 RAMP3O60896 148 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 C1QAP02745 245 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 NPPCP23582 126 aa9.64□□□□□ -0.87
SRSF4-208ENST00000634348 APOBEC3AP31941 199 aaPredicted RBP9.64□□□□□ -0.87
SRSF4-208ENST00000634348 ATG4DQ86TL0 474 aaPredicted RBP9.64□□□□□ -0.87
SRSF4-208ENST00000634348 NBASA2RRP1 2371 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 CGAP01215 116 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 NBEAP1P0C6P0 100 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 FAM231BA6NCW3 169 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 UPK3AO75631 287 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 FAM106CPP0CH98 169 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 CDKN1BP46527 198 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 S4R3C0 116 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 IGLV3-16A0A075B6K0 115 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 J3QT63 122 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 RSPO4Q2I0M5 234 aaPredicted RBP9.63□□□□□ -0.87
SRSF4-208ENST00000634348 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 ZNRF1Q8ND25 227 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 COL16A1Q07092 1604 aaPredicted RBP9.63□□□□□ -0.87
SRSF4-208ENST00000634348 SPTAN1Q13813 2472 aaKnown RBP9.63□□□□□ -0.87
SRSF4-208ENST00000634348 DDX60LQ5H9U9 1706 aaKnown RBP9.63□□□□□ -0.87
SRSF4-208ENST00000634348 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
SRSF4-208ENST00000634348 C9orf118A6NHY6 69 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 TMEM52Q8NDY8 209 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 FOXA2Q9Y261 457 aaPredicted RBP9.62□□□□□ -0.87
SRSF4-208ENST00000634348 IGHV5-10-1A0A0J9YXX1 117 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 PGLYRP1O75594 196 aaPredicted RBP9.62□□□□□ -0.87
SRSF4-208ENST00000634348 CXCL10P02778 98 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 PTGDSP41222 190 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 IGHG3P01860 377 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 NPSP0C0P6 89 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 NANOS3P60323 173 aaKnown RBP9.62□□□□□ -0.87
SRSF4-208ENST00000634348 NPIPB3Q92617 1050 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 ZG16O60844 167 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 DUX3Q96PT4 197 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 RNASE7Q9H1E1 156 aaKnown RBP9.62□□□□□ -0.87
SRSF4-208ENST00000634348 TRA2AQ13595 282 aaKnown RBP eCLIP9.62□□□□□ -0.876e-9■■■■■ 41
SRSF4-208ENST00000634348 IGFBP2P18065 325 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 WFDC9Q8NEX5 89 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 SNHG12Q9BXW3 62 aa9.62□□□□□ -0.87
SRSF4-208ENST00000634348 CD160O95971 181 aa9.61□□□□□ -0.87
SRSF4-208ENST00000634348 IGHV3-23P01764 117 aa9.61□□□□□ -0.87
SRSF4-208ENST00000634348 PEAR1Q5VY43 1037 aaPredicted RBP9.61□□□□□ -0.87
SRSF4-208ENST00000634348 WFDC12Q8WWY7 111 aa9.61□□□□□ -0.87
SRSF4-208ENST00000634348 C16orf97H3BN30 126 aa9.61□□□□□ -0.87
SRSF4-208ENST00000634348 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms