RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OTOFQ9HC10 1997 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 RAMP3O60896 148 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 C21orf62-AS1Q17RA5 79 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 SLC25A28Q96A46 364 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 NPFFR1Q9GZQ6 430 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 NTN3O00634 580 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-209ENST00000627620 FBLN5Q9UBX5 448 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 TET1Q8NFU7 2136 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 EMP1P54849 157 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 CFHR1Q03591 330 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 SOX21Q9Y651 276 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-209ENST00000627620 ARID2Q68CP9 1835 aa10.69□□□□□ -0.7
SCN8A-209ENST00000627620 ATP5LO75964 103 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 DNAL4O96015 105 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 PAX1P15863 534 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 FAM71F2Q6NXP2 309 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 SPACA3Q8IXA5 215 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 FGFBP3Q8TAT2 258 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 OTORQ9NRC9 128 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 CD59P13987 128 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 TBL2Q9Y4P3 447 aaKnown RBP10.68□□□□□ -0.7
SCN8A-209ENST00000627620 FAM209BQ5JX69 171 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 Q6AWC8 147 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 DMRT1Q9Y5R6 373 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 E9PLN8 166 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 SMIM13P0DJ93 91 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 FOXC2Q99958 501 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 A0A1B0GW15 77 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 VDAC2P45880 294 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-209ENST00000627620 GNG5P63218 68 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 LY6DQ14210 128 aa10.68□□□□□ -0.7
SCN8A-209ENST00000627620 TRGV2A0A075B6R0 118 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 RNF126Q9BV68 326 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 GVINP1Q7Z2Y8 2422 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 IZUMO1RA6ND01 250 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 MYOD1P15172 320 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 LEMD1Q68G75 181 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 LINC00518Q8N0U6 118 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 FAM89BQ8N5H3 189 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 GTF3AQ92664 365 aaKnown RBP10.67□□□□□ -0.7
SCN8A-209ENST00000627620 PATJQ8NI35 1801 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 HTN3P15516 51 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 PVRIGQ6DKI7 326 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 CD55P08174 381 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 FOXF2Q12947 444 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 GLMPQ8WWB7 406 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 PRSS22Q9GZN4 317 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 ZNF236Q9UL36 1845 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 CACNA1EQ15878 2313 aa10.67□□□□□ -0.7
SCN8A-209ENST00000627620 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 BTCP35070 178 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 IGHV1-46P01743 117 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 SAMD13Q5VXD3 122 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 RHOGP84095 191 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 ZNF324BQ6AW86 544 aaPredicted RBP10.66□□□□□ -0.7
SCN8A-209ENST00000627620 PAQR4Q8N4S7 273 aaPredicted RBP10.66□□□□□ -0.7
SCN8A-209ENST00000627620 J3QRE1 110 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 CTAG1AP78358 180 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 SNAI2O43623 268 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 HOXA5P20719 270 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 SLC50A1Q9BRV3 221 aa10.66□□□□□ -0.7
SCN8A-209ENST00000627620 GREB1LQ9C091 1923 aaPredicted RBP10.66□□□□□ -0.7
SCN8A-209ENST00000627620 A0A0A6YYD4 124 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 TIMM23O14925 209 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 RPL23P62829 140 aaKnown RBP10.65□□□□□ -0.7
SCN8A-209ENST00000627620 TTC9CQ8N5M4 171 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 C14orf144Q96I85 54 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 RNASE7Q9H1E1 156 aaKnown RBP10.65□□□□□ -0.7
SCN8A-209ENST00000627620 A0A087WWC5 75 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 A8MXK9 166 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 H3BRM9 83 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 EFNA2O43921 213 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 OR9G9P0C7N8 305 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 CRYGSP22914 178 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.7
SCN8A-209ENST00000627620 TOMM7Q9P0U1 55 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 FOXG1P55316 489 aaPredicted RBP10.65□□□□□ -0.7
SCN8A-209ENST00000627620 LDLRAD2Q5SZI1 272 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 MRPL16Q9NX20 251 aaKnown RBP10.65□□□□□ -0.7
SCN8A-209ENST00000627620 HEATR5BQ9P2D3 2071 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 TCRBV4S1A1TA0A5B7 111 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 CD7P09564 240 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 NEUROG3Q9Y4Z2 214 aa10.65□□□□□ -0.7
SCN8A-209ENST00000627620 PRCDQ00LT1 54 aa10.65□□□□□ -0.71
SCN8A-209ENST00000627620 ZNF600Q6ZNG1 722 aa10.65□□□□□ -0.71
SCN8A-209ENST00000627620 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.71
SCN8A-209ENST00000627620 TMEM167AQ8TBQ9 72 aa10.65□□□□□ -0.71
SCN8A-209ENST00000627620 ASCL2Q99929 193 aa10.65□□□□□ -0.71
SCN8A-209ENST00000627620 PSME4Q14997 1843 aa10.64□□□□□ -0.71
SCN8A-209ENST00000627620 TMEM50AO95807 157 aa10.64□□□□□ -0.71
SCN8A-209ENST00000627620 PYYP10082 97 aa10.64□□□□□ -0.71
SCN8A-209ENST00000627620 CCL20P78556 96 aa10.64□□□□□ -0.71
SCN8A-209ENST00000627620 STHQ8IWL8 128 aa10.64□□□□□ -0.71
SCN8A-209ENST00000627620 IGKV1D-8A0A087WSZ0 117 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms