RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PARLQ9H300 379 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 PRDM13Q9H4Q3 707 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 FOXA2Q9Y261 457 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 NDUFB7P17568 137 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 RPL23P62829 140 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 FAM78BQ5VT40 261 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 TEX36Q5VZQ5 186 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF474Q6S9Z5 364 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 OR51G1Q8NGK1 321 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 PACRGQ96M98 296 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 WFIKKN1Q96NZ8 548 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 TMEM14BQ9NUH8 114 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 FUT9Q9Y231 359 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 ARL2-SNX15V9GYD0 113 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 GGCTO75223 188 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 SLC24A4Q8NFF2 622 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 NUP37Q8NFH4 326 aa5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 NEIL1Q96FI4 390 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-244ENST00000627109 CSPG4Q6UVK1 2322 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 INS-IGF2F8WCM5 200 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 NDUFB4O95168 129 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 GYPAP02724 150 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 NPPCP23582 126 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 ID1P41134 155 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 SPRNQ5BIV9 151 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 RNASEH2CQ8TDP1 164 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 OR2V2Q96R30 315 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 VPS25Q9BRG1 176 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 ELOVL1Q9BW60 279 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 ZMAT4Q9H898 229 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 C15orf61A6NNL5 157 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 SOD3P08294 240 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 IRF2P14316 349 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 PYY3Q5JQD4 70 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 TMEM144Q7Z5S9 345 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 LRP11Q86VZ4 500 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 FAM57AQ8TBR7 257 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 DMRT1Q9Y5R6 373 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 MDFIC2A0A1B0GVS7 189 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 SPINK4O60575 86 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 RAB4BP61018 213 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 RAB31Q13636 194 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 MIC13Q5XKP0 118 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 TREML4Q6UXN2 200 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF48Q96MX3 618 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 SFXN3Q9BWM7 321 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 PLEKHA3Q9HB20 300 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 KCNIP2Q9NS61 270 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 DSCAMO60469 2012 aa5.88□□□□□ -1.47
CTNNA1-244ENST00000627109 BSNQ9UPA5 3926 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 J3QKU1 62 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 TNFRSF13BO14836 293 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 PDE6DO43924 150 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 SRP14P37108 136 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 COMPP49747 757 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ATP5IP56385 69 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 CDPF1Q6NVV7 123 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 PNKDQ8N490 385 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 OR2T10Q8NGZ9 312 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF257Q9Y2Q1 563 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 KBTBD11-OT1A0A1B0GTJ5 212 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 SH2D7A6NKC9 451 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 SAP30O75446 220 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 SNRPCP09234 159 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 GAMTQ14353 236 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ITLN1Q8WWA0 313 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 C11orf52Q96A22 123 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 MGST2Q99735 147 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 CALYQ9NYX4 217 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 JKAMPQ9P055 326 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 F6UZH7 168 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 M0QZ24 198 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ATP5G3P48201 142 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 THBS3P49746 956 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 KLF3P57682 345 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF788Q6ZQV5 615 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 C8orf31Q8N9H6 132 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ST6GALNAC3Q8NDV1 305 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 H1FXQ92522 213 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 NEUROG1Q92886 237 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 GAFA1Q96PS6 74 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 GGTLC1Q9BX51 225 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 SERTAD4Q9NUC0 356 aa5.87□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF705FA8MVS1 300 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 DVL1O14640 695 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF705DP0CH99 300 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 ZNF705BP0CI00 300 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 LCN2P80188 198 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 PRR20EP86478 221 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 PRR20CP86479 221 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 PRR20DP86480 221 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 PRR20BP86481 221 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 PRR20AP86496 221 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 CT45A1Q5HYN5 189 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 CT45A3Q8NHU0 189 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 ADTRPQ96IZ2 230 aa5.86□□□□□ -1.47
CTNNA1-244ENST00000627109 LY96Q9Y6Y9 160 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms