RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 RNASE11Q8TAA1 199 aaKnown RBP11.13□□□□□ -0.63
LINC00643-205ENST00000623219 TXN2Q99757 166 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 RTBDNQ9BSG5 229 aaPredicted RBP11.13□□□□□ -0.63
LINC00643-205ENST00000623219 CHRDL1Q9BU40 450 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 NAA60Q9H7X0 242 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 CEPT1Q9Y6K0 416 aa11.13□□□□□ -0.63
LINC00643-205ENST00000623219 A0A0B4J293 547 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 TEX13DA0A0J9YY54 714 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-205ENST00000623219 FABP12A6NFH5 140 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 CRYM-AS1A6NIL9 109 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 NUPL2O15504 423 aaKnown RBP11.12□□□□□ -0.63
LINC00643-205ENST00000623219 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
LINC00643-205ENST00000623219 CDS2O95674 445 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 MT-CO2P00403 227 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 IFNA17P01571 189 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 TNFSF8P32971 234 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 MFAP4P55083 255 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 RELQ04864 619 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-205ENST00000623219 ANKRD55Q3KP44 614 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 SPINK9Q5DT21 86 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 LINC00322Q6ZN03 302 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-205ENST00000623219 OR51S1Q8NGJ8 323 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 RBPMSQ93062 196 aaKnown RBP11.12□□□□□ -0.63
LINC00643-205ENST00000623219 CITED4Q96RK1 184 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 SOSTQ9BQB4 213 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 WFDC10AQ9H1F0 79 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 SCP2D1Q9UJQ7 156 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 GPR132Q9UNW8 380 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
LINC00643-205ENST00000623219 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 K7EMT4 169 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 CORTO00230 105 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 CTSGP08311 255 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 SNCAP37840 140 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
LINC00643-205ENST00000623219 DHODHQ02127 395 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
LINC00643-205ENST00000623219 DEFB125Q8N687 156 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 OR52B4Q8NGK2 314 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 LHFPL5Q8TAF8 219 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 GLYATL2Q8WU03 294 aa11.11□□□□□ -0.63
LINC00643-205ENST00000623219 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
LINC00643-205ENST00000623219 CCDC160A6NGH7 325 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 GNG7O60262 68 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 SUB1P53999 127 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00643-205ENST00000623219 AARDQ4LEZ3 155 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 SCGB3A2Q96PL1 93 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
LINC00643-205ENST00000623219 C20orf24Q9BUV8 137 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 ENY2Q9NPA8 101 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 RYR3Q15413 4870 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 STARD9Q9P2P6 4700 aa11.1□□□□□ -0.63
LINC00643-205ENST00000623219 RBMY1BA6NDE4 496 aaKnown RBP11.09□□□□□ -0.63
LINC00643-205ENST00000623219 RBMY1EA6NEQ0 496 aaKnown RBP11.09□□□□□ -0.63
LINC00643-205ENST00000623219 TSPAN4O14817 238 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 RBMY1DP0C7P1 496 aaKnown RBP11.09□□□□□ -0.63
LINC00643-205ENST00000623219 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
LINC00643-205ENST00000623219 FAUP35544 74 aaKnown RBP11.09□□□□□ -0.63
LINC00643-205ENST00000623219 TMEM268Q5VZI3 342 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 PVRIGQ6DKI7 326 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 LAMTOR1Q6IAA8 161 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 TRIM63Q969Q1 353 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 OR10C1Q96KK4 312 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 RBM38Q9H0Z9 239 aaKnown RBP11.09□□□□□ -0.63
LINC00643-205ENST00000623219 MCUBQ9NWR8 336 aa11.09□□□□□ -0.63
LINC00643-205ENST00000623219 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 ETV6P41212 452 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 NPBWR1P48145 328 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 AP3S2P59780 193 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 SPCS3P61009 180 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 BSXQ3C1V8 233 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 SELENOHQ8IZQ5 122 aaKnown RBP11.08□□□□□ -0.64
LINC00643-205ENST00000623219 DUSP18Q8NEJ0 188 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 TMEM230Q96A57 120 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 GALNT14Q96FL9 552 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 HIPK2Q9H2X6 1198 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
LINC00643-205ENST00000623219 CACNG5Q9UF02 275 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 V9GYH0 126 aa11.08□□□□□ -0.64
LINC00643-205ENST00000623219 ZNF701M0R085 212 aaPredicted RBP11.07□□□□□ -0.64
LINC00643-205ENST00000623219 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
LINC00643-205ENST00000623219 S100A5P33763 92 aa11.07□□□□□ -0.64
LINC00643-205ENST00000623219 Q6ZRM9 215 aa11.07□□□□□ -0.64
LINC00643-205ENST00000623219 LYSTQ99698 3801 aa11.07□□□□□ -0.64
LINC00643-205ENST00000623219 GINS3Q9BRX5 216 aa11.07□□□□□ -0.64
LINC00643-205ENST00000623219 KCNIP3Q9Y2W7 256 aa11.07□□□□□ -0.64
LINC00643-205ENST00000623219 IGHV7-4-1A0A0J9YVY3 117 aa11.06□□□□□ -0.64
LINC00643-205ENST00000623219 YIF1AO95070 293 aa11.06□□□□□ -0.64
LINC00643-205ENST00000623219 OPRK1P41145 380 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms