RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 A0A0G2JRQ6 117 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 H3BMQ9 156 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 ST8SIA3O43173 380 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 MT-CO2P00403 227 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 LYL1P12980 280 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 RPL5P46777 297 aaKnown RBP11.94□□□□□ -0.5
DDB2-216ENST00000622878 MEF2DQ14814 521 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 Q56UQ5 140 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 CCDC71LQ8N9Z2 235 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 SOSTQ9BQB4 213 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 RETNQ9HD89 108 aa11.94□□□□□ -0.5
DDB2-216ENST00000622878 GAR1Q9NY12 217 aaKnown RBP11.94□□□□□ -0.5
DDB2-216ENST00000622878 PLECQ15149 4684 aaKnown RBP11.93□□□□□ -0.5
DDB2-216ENST00000622878 C15orf62A8K5M9 175 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 TSPAN4O14817 238 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 B3GALNT1O75752 331 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 ATG12O94817 140 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 CDS2O95674 445 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 AKR1C2P52895 323 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 MFAP4P55083 255 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
DDB2-216ENST00000622878 IL18Q14116 193 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 SURF2Q15527 256 aaPredicted RBP11.93□□□□□ -0.5
DDB2-216ENST00000622878 ANKRD55Q3KP44 614 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 RBPMS2Q6ZRY4 209 aaKnown RBP11.93□□□□□ -0.5
DDB2-216ENST00000622878 OR4C16Q8NGL9 310 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 GLYATL2Q8WU03 294 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 ISOC1Q96CN7 298 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 OR10C1Q96KK4 312 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 NXF2Q9GZY0 626 aaKnown RBP11.93□□□□□ -0.5
DDB2-216ENST00000622878 TMEM222Q9H0R3 208 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
DDB2-216ENST00000622878 IGHV3OR16-8A0A075B7F1 116 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 GSTZ1O43708 216 aaPredicted RBP11.92□□□□□ -0.5
DDB2-216ENST00000622878 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 AKAIN1P0CW23 69 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 TRIM16LQ309B1 348 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 Q6ZRM9 215 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
DDB2-216ENST00000622878 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
DDB2-216ENST00000622878 ANKRD20A5PA0PJZ0 165 aa11.91□□□□□ -0.5
DDB2-216ENST00000622878 DISC1C4P0D8 188 aa11.91□□□□□ -0.5
DDB2-216ENST00000622878 NUPL2O15504 423 aaKnown RBP11.91□□□□□ -0.5
DDB2-216ENST00000622878 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
DDB2-216ENST00000622878 OR5AC1P0C628 307 aa11.91□□□□□ -0.5
DDB2-216ENST00000622878 RELQ04864 619 aaPredicted RBP11.91□□□□□ -0.5
DDB2-216ENST00000622878 FAM110AQ9BQ89 295 aa11.91□□□□□ -0.5
DDB2-216ENST00000622878 C6orf62Q9GZU0 229 aaPredicted RBP11.91□□□□□ -0.5
DDB2-216ENST00000622878 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
DDB2-216ENST00000622878 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
DDB2-216ENST00000622878 TEX13DA0A0J9YY54 714 aaPredicted RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 CRYM-AS1A6NIL9 109 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 IFNA17P01571 189 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 RNASE2P10153 161 aaKnown RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 TNFSF8P32971 234 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 ETV6P41212 452 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 SELENOHQ8IZQ5 122 aaKnown RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 SLC35G3Q8N808 338 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 OR51S1Q8NGJ8 323 aa11.9□□□□□ -0.5
DDB2-216ENST00000622878 PINX1Q96BK5 328 aaKnown RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 RRNAD1Q96FB5 475 aaKnown RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 RSL24D1Q9UHA3 163 aaKnown RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 C14orf166Q9Y224 244 aaKnown RBP11.9□□□□□ -0.5
DDB2-216ENST00000622878 IGHV7-4-1A0A0J9YVY3 117 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 CHEK1O14757 476 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 SNCAP37840 140 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 FAM219AQ8IW50 185 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 PRRT1Q99946 306 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 GGTLC1Q9BX51 225 aa11.89□□□□□ -0.51
DDB2-216ENST00000622878 LOC102724200A0A096LPH7 203 aaPredicted RBP11.88□□□□□ -0.51
DDB2-216ENST00000622878 GNG7O60262 68 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 DHODHQ02127 395 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 RBPMSQ93062 196 aaKnown RBP11.88□□□□□ -0.51
DDB2-216ENST00000622878 TMEM230Q96A57 120 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 RNF2Q99496 336 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 PDCD10Q9BUL8 212 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 RHPN1-AS1Q9BWJ2 59 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
DDB2-216ENST00000622878 MRPL36Q9P0J6 103 aaKnown RBP11.88□□□□□ -0.51
DDB2-216ENST00000622878 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
DDB2-216ENST00000622878 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 YIF1AO95070 293 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 TMEM50AO95807 157 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 NPBWR1P48145 328 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
DDB2-216ENST00000622878 SPCS3P61009 180 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 FAM90A2PQ658T7 463 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 TOMM20LQ6UXN7 152 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 DUSP18Q8NEJ0 188 aa11.87□□□□□ -0.51
DDB2-216ENST00000622878 MCFD2Q8NI22 146 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms