RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 UQCRFS1P47985 274 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 PMS2P11Q13670 270 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 PDPNQ86YL7 162 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 OR5B3Q8NH48 314 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 TVP23CQ96ET8 276 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 WASHC3Q9Y3C0 194 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 TGIF2-C20orf24A0A0A6YYL0 155 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 IGHV2-26A0A0B4J1V2 119 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 RPL8P62917 257 aaKnown RBP17.21■□□□□ 0.35
LIME1-210ENST00000621325 C4orf17Q53FE4 359 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 C10orf55Q5SWW7 151 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 C11orf71Q6IPW1 123 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 FRZBQ92765 325 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 RAB1BQ9H0U4 201 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 CACNA1AO00555 2505 aa17.21■□□□□ 0.35
LIME1-210ENST00000621325 RPLP1P05386 114 aaKnown RBP17.2■□□□□ 0.34
LIME1-210ENST00000621325 MEF2BQ02080 365 aaPredicted RBP17.2■□□□□ 0.34
LIME1-210ENST00000621325 ELOBQ15370 118 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 C16orf54Q6UWD8 224 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 C22orf15Q8WYQ4 148 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 FKBP11Q9NYL4 201 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 PLXNB1O43157 2135 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 ARHGAP32A7KAX9 2087 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 PPIAL4CA0A0B4J2A2 164 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 PPIAL4GP0DN37 164 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 MLANAQ16655 118 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 WDR25Q64LD2 544 aaPredicted RBP17.2■□□□□ 0.34
LIME1-210ENST00000621325 P2RX4Q99571 388 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 COMMD5Q9GZQ3 224 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 TPSG1Q9NRR2 321 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 NDUFA4L2Q9NRX3 87 aa17.2■□□□□ 0.34
LIME1-210ENST00000621325 FSTL3O95633 263 aa17.19■□□□□ 0.34
LIME1-210ENST00000621325 IGLV1-47P01700 117 aa17.19■□□□□ 0.34
LIME1-210ENST00000621325 RNASE2P10153 161 aaKnown RBP17.19■□□□□ 0.34
LIME1-210ENST00000621325 COX7A1P24310 79 aa17.19■□□□□ 0.34
LIME1-210ENST00000621325 TEPPQ6URK8 271 aa17.19■□□□□ 0.34
LIME1-210ENST00000621325 SLC35E3Q7Z769 313 aa17.19■□□□□ 0.34
LIME1-210ENST00000621325 TMEM167AQ8TBQ9 72 aa17.19■□□□□ 0.34
LIME1-210ENST00000621325 CGB1A6NKQ9 187 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 ENSAO43768 121 aaKnown RBP17.18■□□□□ 0.34
LIME1-210ENST00000621325 SLC25A17O43808 307 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 PAGE4O60829 102 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 IGFBP2P18065 325 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 PSMB3P49720 205 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 ZNF430Q9H8G1 570 aaPredicted RBP17.18■□□□□ 0.34
LIME1-210ENST00000621325 C22orf46C9J442 243 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 HLA-DRB5Q30154 266 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 BSXQ3C1V8 233 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 OR8B3Q8NGG8 313 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 OR8B2Q96RD0 313 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 PCGF1Q9BSM1 259 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 NAV3Q8IVL0 2385 aa17.18■□□□□ 0.34
LIME1-210ENST00000621325 A0A1W2PPV4 95 aa17.17■□□□□ 0.34
LIME1-210ENST00000621325 USF1P22415 310 aaPredicted RBP17.17■□□□□ 0.34
LIME1-210ENST00000621325 STPG3Q8N7X2 389 aa17.17■□□□□ 0.34
LIME1-210ENST00000621325 OR1L8Q8NGR8 309 aa17.17■□□□□ 0.34
LIME1-210ENST00000621325 C2orf83Q53S99 150 aa17.17■□□□□ 0.34
LIME1-210ENST00000621325 NEIL1Q96FI4 390 aaPredicted RBP17.17■□□□□ 0.34
LIME1-210ENST00000621325 IGKV1OR2-108A0A075B7D4 117 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 HNF1AP20823 631 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 IL3RAP26951 378 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 OR4F5Q8NH21 305 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 OR4F4Q96R69 305 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 CLEC7AQ9BXN2 247 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 GNLYP22749 145 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 WT1-ASQ06250 92 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 MRGPRG-AS1Q2M3A8 158 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 MANBALQ9NQG1 85 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 ONECUT1Q9UBC0 465 aa17.16■□□□□ 0.34
LIME1-210ENST00000621325 TGOLN2O43493 480 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 AMBPP02760 352 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 CNTFRP26992 372 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 MC5RP33032 325 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 SPATA31B1PQ5VZV4 182 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 TEX38Q6PEX7 206 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 VSTM2AQ8TAG5 236 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 RPUSD4Q96CM3 377 aaKnown RBP17.15■□□□□ 0.34
LIME1-210ENST00000621325 BUB1B-PAK6H3BSN5 160 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 PRRX1P54821 245 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 UBE2G2P60604 165 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 C8orf46Q8TAG6 207 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 RAB1CQ92928 201 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 SDF2L1Q9HCN8 221 aa17.15■□□□□ 0.34
LIME1-210ENST00000621325 SEPSECSQ9HD40 501 aaKnown RBP17.15■□□□□ 0.34
LIME1-210ENST00000621325 TMEM238LA0A1B0GVL6 79 aa17.14■□□□□ 0.33
LIME1-210ENST00000621325 ARL14EPLP0DKL9 152 aa17.14■□□□□ 0.33
LIME1-210ENST00000621325 OR4A5Q8NH83 315 aa17.14■□□□□ 0.33
LIME1-210ENST00000621325 ITLN2Q8WWU7 325 aaPredicted RBP17.14■□□□□ 0.33
LIME1-210ENST00000621325 TNFRSF14Q92956 283 aa17.14■□□□□ 0.33
LIME1-210ENST00000621325 LPAR2Q9HBW0 351 aa17.14■□□□□ 0.33
LIME1-210ENST00000621325 PNKDQ8N490 385 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 OR4P4Q8NGL7 312 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 SMIM7Q9BQ49 75 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 A0A087WWC5 75 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 NDUFS7O75251 213 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 GATA2P23769 480 aaPredicted RBP17.13■□□□□ 0.33
LIME1-210ENST00000621325 CDKN1AP38936 164 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 RPL29P47914 159 aaKnown RBP17.13■□□□□ 0.33
LIME1-210ENST00000621325 PRR20EP86478 221 aa17.13■□□□□ 0.33
LIME1-210ENST00000621325 PRR20CP86479 221 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms