RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CACNA1GO43497 2377 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 UPK2O00526 184 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 IGHG3P01860 377 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 C8orf88P0DMB2 117 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 HNRNPA3P51991 378 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 MLANAQ16655 118 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 C1orf210Q8IVY1 113 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 NHLRC2Q8NBF2 726 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 COMMD5Q9GZQ3 224 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 MRPL27Q9P0M9 148 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 CBY1Q9Y3M2 126 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 KNTC1P50748 2209 aa15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 KBTBD11-OT1A0A1B0GTJ5 212 aa15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 LNP1A1A4G5 178 aa15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 ASPHD1Q5U4P2 390 aa15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 MOGAT3Q86VF5 341 aa15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 WIPF2Q8TF74 440 aaPredicted RBP15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 RAI1Q7Z5J4 1906 aaPredicted RBP15.96■□□□□ 0.15
PDLIM3-212ENST00000620787 NTF3P20783 257 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 C2orf83Q53S99 150 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 MORN5Q5VZ52 161 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 FAM167A-AS1Q96KT0 104 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 OR2V2Q96R30 315 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 SSBP3Q9BWW4 388 aaPredicted RBP15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 NCOR1P1Q9H4R4 102 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 ZNF331Q9NQX6 463 aaPredicted RBP15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 DSPP15924 2871 aaKnown RBP15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 TCF21O43680 179 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 MBD6Q96DN6 1003 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 SLC25A2Q9BXI2 301 aa15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 INTS1Q8N201 2190 aaKnown RBP15.95■□□□□ 0.14
PDLIM3-212ENST00000620787 TEX50A0A1B0GTY4 177 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 PSMB11A5LHX3 300 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 SRRM4A7MD48 611 aaKnown RBP15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 LHBP01229 141 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 SELENOVP59797 346 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 FAM201AQ5SY85 155 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 BORCS7Q96B45 105 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 LINC00479Q96M42 142 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 CLEC7AQ9BXN2 247 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 TRAV5A0A0B4J249 113 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 IGKV1-16P04430 117 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 RNASE2P10153 161 aaKnown RBP15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 MAJINQ3KP22 176 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 DUX4L9Q6RFH8 374 aaPredicted RBP15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 ATOH7Q8N100 152 aa15.94■□□□□ 0.14
PDLIM3-212ENST00000620787 GNG10P50151 68 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 GDF5OSQ5U4N7 250 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 LCN12Q6JVE5 192 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 RASL11AQ6T310 242 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 SPACA3Q8IXA5 215 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 KLHDC1Q8N7A1 406 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 MRPL32Q9BYC8 188 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 UBE2L3P68036 154 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 OR1L8Q8NGR8 309 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 RAB9BQ9NP90 201 aa15.93■□□□□ 0.14
PDLIM3-212ENST00000620787 ZDBF2Q9HCK1 2354 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 TRAV34A0A0B4J273 112 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 CD69Q07108 199 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 STUMQ69YW2 141 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 ARRDC1-AS1Q9H2J1 176 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 CT45A6P0DMU7 189 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 CT45A5P0DMU8 189 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 CT45A7P0DMV0 189 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 TSPOP30536 169 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 ATP5IP56385 69 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 TNXAQ16473 311 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 FAM231DQ6ZW35 169 aa15.92■□□□□ 0.14
PDLIM3-212ENST00000620787 OR10W1Q8NGF6 305 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 ITLN1Q8WWA0 313 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 PLSCR4Q9NRQ2 329 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 ZNF355PQ9NSJ1 428 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 C19orf67A6NJJ6 358 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 MFAP2P55001 183 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 PMCHL1Q16048 86 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 NUP35Q8NFH5 326 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 ORAOV1Q8WV07 137 aa15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 ZNF71Q9NQZ8 489 aaPredicted RBP15.91■□□□□ 0.14
PDLIM3-212ENST00000620787 SAA1P0DJI8 122 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 KLF5Q13887 457 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 FAM222BQ8WU58 562 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 ZNF714Q96N38 554 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 MRPS16Q9Y3D3 137 aaKnown RBP15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 FAM181BA6NEQ2 426 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 EBLN2Q6P2I7 272 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 BHLHA15Q7RTS1 189 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 SNRNP40Q96DI7 357 aaKnown RBP15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 GRAMD2BQ96HH9 432 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 BET1LQ9NYM9 111 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 ZNRD1Q9P1U0 126 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 AMMECR1Q9Y4X0 333 aaPredicted RBP15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 SLC25A15Q9Y619 301 aa15.9■□□□□ 0.14
PDLIM3-212ENST00000620787 PRR33A8MZF0 331 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 SPRY3O43610 288 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 PYYP10082 97 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 CD59P13987 128 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 ZNF329Q86UD4 541 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 NUDT10Q8NFP7 164 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 OR5B3Q8NH48 314 aa15.89■□□□□ 0.13
PDLIM3-212ENST00000620787 OR2T6Q8NHC8 308 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms