RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 IGHV7-4-1A0A0J9YVY3 117 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 CD3DP04234 171 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 CTSDP07339 412 aaPredicted RBP16.31■□□□□ 0.2
SRRT-218ENST00000620394 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
SRRT-218ENST00000620394 KIR2DL5AQ8N109 375 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 KIR2DL5BQ8NHK3 375 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 TP53RKQ96S44 253 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 EXTL2Q9UBQ6 330 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 UBE2CO00762 179 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 CHEK1O14757 476 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 CD74P04233 296 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 PGAM2P15259 253 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 PI3P19957 117 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 ERHP84090 104 aaKnown RBP16.3■□□□□ 0.2
SRRT-218ENST00000620394 IZUMO4Q1ZYL8 232 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 PVRIGQ6DKI7 326 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 CEMP1Q6PRD7 247 aaPredicted RBP16.3■□□□□ 0.2
SRRT-218ENST00000620394 RPP25LQ8N5L8 163 aaKnown RBP16.3■□□□□ 0.2
SRRT-218ENST00000620394 ABHD1Q96SE0 405 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 RNF2Q99496 336 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 RHPN1-AS1Q9BWJ2 59 aa16.3■□□□□ 0.2
SRRT-218ENST00000620394 TNFRSF9Q07011 255 aa16.29■□□□□ 0.2
SRRT-218ENST00000620394 TMEM116Q8NCL8 245 aa16.29■□□□□ 0.2
SRRT-218ENST00000620394 OR4D10Q8NGI6 311 aa16.29■□□□□ 0.2
SRRT-218ENST00000620394 C15orf40Q8WUR7 153 aa16.29■□□□□ 0.2
SRRT-218ENST00000620394 KLK5Q9Y337 293 aaPredicted RBP16.29■□□□□ 0.2
SRRT-218ENST00000620394 A0A0B4J293 547 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 A0A0J9YWU9 116 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 BMI1P35226 326 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 AKR1C2P52895 323 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 PPP5CP53041 499 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 DEFB135Q30KP9 77 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 GPR107Q5VW38 600 aa16.28■□□□□ 0.2
SRRT-218ENST00000620394 C3orf85A0A1B0GTC6 90 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 ST8SIA3O43173 380 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 SPRY2O43597 315 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 GNG7O60262 68 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 ATG12O94817 140 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 ATF4P18848 351 aaPredicted RBP16.27■□□□□ 0.2
SRRT-218ENST00000620394 UCP1P25874 307 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 FAM90A2PQ658T7 463 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 TMEM229BQ8NBD8 167 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 TERB2Q8NHR7 220 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 PINX1Q96BK5 328 aaKnown RBP16.27■□□□□ 0.2
SRRT-218ENST00000620394 GALNT14Q96FL9 552 aa16.27■□□□□ 0.2
SRRT-218ENST00000620394 B3GALNT1O75752 331 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 IGHV3-48P01763 117 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 TAS2R19P59542 299 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 SSBP1Q04837 148 aaKnown RBP16.26■□□□□ 0.19
SRRT-218ENST00000620394 SPINK9Q5DT21 86 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 LYG2Q86SG7 212 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 SLC35G3Q8N808 338 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 CCDC71LQ8N9Z2 235 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 OR13C8Q8NGS7 320 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 ZFAND1Q8TCF1 268 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 RNF183Q96D59 192 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 MIXL1Q9H2W2 232 aa16.26■□□□□ 0.19
SRRT-218ENST00000620394 PCLOQ9Y6V0 5065 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 TRAV14DV4A0A0A6YYC5 116 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 GABARAPH6UMI1 98 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 YIF1AO95070 293 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 NPBWR1P48145 328 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 AARDQ4LEZ3 155 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 STPG3Q8N7X2 389 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 GINS3Q9BRX5 216 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 VSIRQ9H7M9 311 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 ZFAND3Q9H8U3 227 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 MAP6D1Q9H9H5 199 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 COPZ2Q9P299 210 aa16.25■□□□□ 0.19
SRRT-218ENST00000620394 IGHV3-49A0A0A0MS15 119 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 A0A0G2JRQ6 117 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 CORTO00230 105 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 RAB3DO95716 219 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 CD5P06127 495 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 RNASE2P10153 161 aaKnown RBP16.24■□□□□ 0.19
SRRT-218ENST00000620394 SNCAP37840 140 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 MRPS10P82664 201 aaKnown RBP16.24■□□□□ 0.19
SRRT-218ENST00000620394 EWSR1Q01844 656 aaKnown RBP eCLIP16.24■□□□□ 0.19
SRRT-218ENST00000620394 STEAP1BQ6NZ63 245 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 TOMM20LQ6UXN7 152 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 DUSP18Q8NEJ0 188 aa16.24■□□□□ 0.19
SRRT-218ENST00000620394 ALDH3B2P48448 385 aa16.23■□□□□ 0.19
SRRT-218ENST00000620394 CMC4P56277 68 aaPredicted RBP16.23■□□□□ 0.19
SRRT-218ENST00000620394 TRIM16LQ309B1 348 aa16.23■□□□□ 0.19
SRRT-218ENST00000620394 BSXQ3C1V8 233 aa16.23■□□□□ 0.19
SRRT-218ENST00000620394 ZNF600Q6ZNG1 722 aa16.23■□□□□ 0.19
SRRT-218ENST00000620394 PDCD10Q9BUL8 212 aa16.23■□□□□ 0.19
SRRT-218ENST00000620394 MRPS26Q9BYN8 205 aaKnown RBP16.23■□□□□ 0.19
SRRT-218ENST00000620394 DEDDO75618 318 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 IFNA17P01571 189 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 RPL35AP18077 110 aaKnown RBP16.22■□□□□ 0.19
SRRT-218ENST00000620394 SP6Q3SY56 376 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 SCGB2B2Q4G0G5 96 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 LGALS9CQ6DKI2 356 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 APRG1Q8IVJ8 170 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 TMEM217Q8N7C4 229 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 MARCH1Q8TCQ1 289 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 SMIM4Q8WVI0 70 aa16.22■□□□□ 0.19
SRRT-218ENST00000620394 C6orf62Q9GZU0 229 aaPredicted RBP16.22■□□□□ 0.19
SRRT-218ENST00000620394 TMEM222Q9H0R3 208 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms