RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 NHLRC2Q8NBF2 726 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 TMEM68Q96MH6 324 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 GAFA1Q96PS6 74 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 TMEM208Q9BTX3 173 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 SERTAD4Q9NUC0 356 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 YLPM1P49750 1951 aaKnown RBP16.61■□□□□ 0.25
NEK3-208ENST00000618534 SMIM27A0A1W2PRY6 76 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 A0A1W2PS18 150 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 CA1P00915 261 aaPredicted RBP16.61■□□□□ 0.25
NEK3-208ENST00000618534 SRIP30626 198 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 PPOXP50336 477 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 BATFQ16520 125 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 RTL8BQ17RB0 113 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 CYB5R2Q6BCY4 276 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 FAM216BQ8N7L0 139 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 SNRNP40Q96DI7 357 aaKnown RBP16.61■□□□□ 0.25
NEK3-208ENST00000618534 CCL13Q99616 98 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 SLC25A33Q9BSK2 321 aa16.61■□□□□ 0.25
NEK3-208ENST00000618534 ICE1Q9Y2F5 2266 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 TRAV5A0A0B4J249 113 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 ZNF253O75346 499 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 SAA1P0DJI8 122 aaPredicted RBP16.6■□□□□ 0.25
NEK3-208ENST00000618534 C8orf88P0DMB2 117 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 GLRXP35754 106 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 RND1Q92730 232 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 RNF7Q9UBF6 113 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 CDC42EP3Q9UKI2 254 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 A0A1W2PRE2 83 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 IGFL2Q6UWQ7 119 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 PNKDQ8N490 385 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 RNF2Q99496 336 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 ASPMQ8IZT6 3477 aa16.6■□□□□ 0.25
NEK3-208ENST00000618534 ZFHX4Q86UP3 3567 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 WT1P19544 449 aaPredicted RBP16.59■□□□□ 0.25
NEK3-208ENST00000618534 CD69Q07108 199 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 COX19Q49B96 90 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 SLC25A48Q6ZT89 311 aaKnown RBP16.59■□□□□ 0.25
NEK3-208ENST00000618534 OR4B1Q8NGF8 309 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 C19orf24Q9BVV8 132 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 DLEU1O43261 78 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 OR1L8Q8NGR8 309 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 FAM167A-AS1Q96KT0 104 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 LINC00479Q96M42 142 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 SLC25A2Q9BXI2 301 aa16.59■□□□□ 0.25
NEK3-208ENST00000618534 RPUSD1Q9UJJ7 312 aaKnown RBP16.59■□□□□ 0.25
NEK3-208ENST00000618534 HLA-DQA1P01909 254 aa16.58■□□□□ 0.25
NEK3-208ENST00000618534 GATA4P43694 442 aa16.58■□□□□ 0.25
NEK3-208ENST00000618534 UBE2L3P68036 154 aaKnown RBP16.58■□□□□ 0.25
NEK3-208ENST00000618534 LOXL4Q96JB6 756 aa16.58■□□□□ 0.25
NEK3-208ENST00000618534 LPAR2Q9HBW0 351 aa16.58■□□□□ 0.25
NEK3-208ENST00000618534 IGLV3-9A0A075B6K5 115 aa16.58■□□□□ 0.24
NEK3-208ENST00000618534 ZNF474Q6S9Z5 364 aaPredicted RBP16.58■□□□□ 0.24
NEK3-208ENST00000618534 OR5B3Q8NH48 314 aa16.58■□□□□ 0.24
NEK3-208ENST00000618534 OR2T6Q8NHC8 308 aa16.58■□□□□ 0.24
NEK3-208ENST00000618534 FAM168AQ92567 244 aa16.58■□□□□ 0.24
NEK3-208ENST00000618534 BET1LQ9NYM9 111 aa16.58■□□□□ 0.24
NEK3-208ENST00000618534 ZNF324O75467 553 aaPredicted RBP16.57■□□□□ 0.24
NEK3-208ENST00000618534 TNFAIP6P98066 277 aaPredicted RBP16.57■□□□□ 0.24
NEK3-208ENST00000618534 SSBP3Q9BWW4 388 aaPredicted RBP16.57■□□□□ 0.24
NEK3-208ENST00000618534 PSMB11A5LHX3 300 aa16.57■□□□□ 0.24
NEK3-208ENST00000618534 CTRLP40313 264 aa16.57■□□□□ 0.24
NEK3-208ENST00000618534 SSBP2P81877 361 aaPredicted RBP16.57■□□□□ 0.24
NEK3-208ENST00000618534 TIMM23BQ5SRD1 257 aa16.57■□□□□ 0.24
NEK3-208ENST00000618534 LINC00574Q9H8X3 128 aa16.57■□□□□ 0.24
NEK3-208ENST00000618534 DCAF16Q9NXF7 216 aa16.57■□□□□ 0.24
NEK3-208ENST00000618534 IZUMO1RA6ND01 250 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 MBD3L4A6NDZ8 208 aaPredicted RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 MBD3L3A6NE82 208 aaPredicted RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 MBD3L5A6NJ08 208 aaPredicted RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 IGHV1-46P01743 117 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 NPSP0C0P6 89 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 SPATA45Q537H7 98 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 NIT1Q86X76 327 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 MBD3L2Q8NHZ7 208 aaPredicted RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 MRPL32Q9BYC8 188 aaKnown RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 APCSP02743 223 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 USF1P22415 310 aaPredicted RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 ATP5IP56385 69 aaPredicted RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 SLAQ13239 276 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 ZNF788Q6ZQV5 615 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 FAM19A2Q8N3H0 131 aa16.56■□□□□ 0.24
NEK3-208ENST00000618534 MRPL20Q9BYC9 149 aaKnown RBP16.56■□□□□ 0.24
NEK3-208ENST00000618534 CFAP47Q6ZTR5 3102 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 PYYP10082 97 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 CHRNB4P30926 498 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 GOLT1BQ9Y3E0 138 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 DLL1O00548 723 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 C3orf79P0CE67 100 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 RPRMLQ8N4K4 120 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 TSKUQ8WUA8 353 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 HARBI1Q96MB7 349 aa16.55■□□□□ 0.24
NEK3-208ENST00000618534 PLCE1Q9P212 2302 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 E7EUB6 86 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 ZNF714Q96N38 554 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 COMMD5Q9GZQ3 224 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 DNAJC4Q9NNZ3 241 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 ZNF331Q9NQX6 463 aaPredicted RBP16.54■□□□□ 0.24
NEK3-208ENST00000618534 NDUFA4L2Q9NRX3 87 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 TM4SF5O14894 197 aa16.54■□□□□ 0.24
NEK3-208ENST00000618534 DEFB123Q8N688 67 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms