RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 CLINT1Q14677 625 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 AKIRIN2Q53H80 203 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ZNF491Q8N8L2 437 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 TMEM167AQ8TBQ9 72 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 DTD1Q8TEA8 209 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 NPIPB3Q92617 1050 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 LSM10Q969L4 123 aaKnown RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ZNF486Q96H40 463 aaPredicted RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 CMTM3Q96MX0 182 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 LYSTQ99698 3801 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 C16orf95Q9H693 158 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 RABAC1Q9UI14 185 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 DMRT1Q9Y5R6 373 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 WI2-2373I1.2A0A1W2PRP0 233 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 LINC01619G3V211 115 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 CREBL2O60519 120 aaPredicted RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 TMEM127O75204 238 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 NDUFB6O95139 128 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 DHFRP00374 187 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 HSPB1P04792 205 aaKnown RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 IGF1P05019 195 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 DEFB1P60022 68 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 HSPE1P61604 102 aaKnown RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 AKR1C1Q04828 323 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 MSMO1Q15800 293 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ZNF124Q15973 351 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 NDUFA11Q86Y39 141 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 TCTE3Q8IZS6 198 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 THAP6Q8TBB0 222 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 SCGB3A2Q96PL1 93 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 FANCD2OSQ96PS1 177 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 SOSTQ9BQB4 213 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ELOVL1Q9BW60 279 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 RBKSQ9H477 322 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 RABL2AQ9UBK7 228 aaPredicted RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 PEF1Q9UBV8 284 aaKnown RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 PRNDQ9UKY0 176 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 RABL2BQ9UNT1 228 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 SMLR1H3BR10 107 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 NUPL2O15504 423 aaKnown RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 GSTZ1O43708 216 aaPredicted RBP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 CDS2O95674 445 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ELANEP08246 267 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ORM2P19652 201 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 TBPP20226 339 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 KIR2DS2P43631 304 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 FOXE3Q13461 319 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ACOT7LQ6ZUV0 252 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 ZBTB34Q8NCN2 500 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 COQ8AQ8NI60 647 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 HIPK2Q9H2X6 1198 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 BET1LQ9NYM9 111 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 C21orf62Q9NYP8 219 aa3.55□□□□□ -1.84
SYCP1-210ENST00000618516 PUS1Q9Y606 427 aaKnown RBP eCLIP3.55□□□□□ -1.84
SYCP1-210ENST00000618516 A0A0G2JLM5 398 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 BMPR1BO00238 502 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 ITGB1BP1O14713 200 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CTDSPLO15194 276 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 SPDEFO95238 335 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CTRB1P17538 263 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 UCP1P25874 307 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 NPY1RP25929 384 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CDX1P47902 265 aaPredicted RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 RPL15P61313 204 aaKnown RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 LYZP61626 148 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 EIF4EBP1Q13541 118 aaPredicted RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 IGFL4Q6B9Z1 124 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CTRB2Q6GPI1 263 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 FAM71F2Q6NXP2 309 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 ZNF767PQ75MW2 155 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 PUSL1Q8N0Z8 303 aaKnown RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 SLC24A4Q8NFF2 622 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 OR5B3Q8NH48 314 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CCDC140Q96MF4 163 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 FAM110AQ9BQ89 295 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 SLC25A21Q9BQT8 299 aaPredicted RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 FNDC4Q9H6D8 234 aaPredicted RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 RANGRFQ9HD47 186 aaPredicted RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 MMP24Q9Y5R2 645 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 J3KRW8 73 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 L7N2F9 121 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 SFT2D2O95562 160 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CRYGBP07316 175 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 FGF2P09038 288 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 LGALS1P09382 135 aaKnown RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 CD7P09564 240 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 NKX2-1P43699 371 aaPredicted RBP3.54□□□□□ -1.84
SYCP1-210ENST00000618516 VAMP2P63027 116 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 ZNF90Q03938 601 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 TNFRSF9Q07011 255 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 ASAH1Q13510 395 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 SMCO1Q147U7 214 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 TATDN3Q17R31 274 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 TIGITQ495A1 244 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 LYG2Q86SG7 212 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 Q8N2B8 174 aa3.54□□□□□ -1.84
SYCP1-210ENST00000618516 C12orf45Q8N5I9 185 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms