RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SPRY2O43597 315 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 UMODP07911 640 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PSMB2P49721 201 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 OR5H6Q8NGV6 325 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 NOTCH4Q99466 2003 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 C12orf77C9JDV5 145 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PEBP1P30086 187 aaKnown RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 UCN2Q96RP3 112 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 GABARAPL3Q9BY60 117 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 SLC25A15Q9Y619 301 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 PLCE1Q9P212 2302 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 WNT3P56703 355 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 CD83Q01151 205 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 OR10G9Q8NGN4 311 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 IGHV3-72A0A0B4J1Y9 119 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 ZNF705GA8MUZ8 300 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 JOSD1Q15040 202 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 MPV17L2Q567V2 206 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 ANGPTL6Q8NI99 470 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 RFESDQ8TAC1 157 aa2.77□□□□□ -1.97
LPP-220ENST00000617246 EAF1Q96JC9 268 aaPredicted RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 ZNF385AQ96PM9 386 aaKnown RBP2.77□□□□□ -1.97
LPP-220ENST00000617246 SFTA2Q6UW10 78 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 CYB561D1Q8N8Q1 229 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 P2RY1P47900 373 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 TCL1AP56279 114 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 AWAT1Q58HT5 328 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 FAM213BQ8TBF2 198 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 PARP12Q9H0J9 701 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 TBX6O95947 436 aaPredicted RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 PEX11BO96011 259 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 PFN1P07737 140 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 SURF2Q15527 256 aaPredicted RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 IGFL2Q6UWQ7 119 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 TMEM219Q86XT9 240 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 LY96Q9Y6Y9 160 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 CDK5R1Q15078 307 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 NHLH2Q02577 135 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 A0A0G2JK05 382 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 PRR32B1ATL7 298 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 IGHV1-46P01743 117 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 ANKRD39Q53RE8 183 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 ARID1BQ8NFD5 2236 aaPredicted RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 SUPT4H1P63272 117 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 MRPL23Q16540 153 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 RNASEH2CQ8TDP1 164 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 KNL1Q8NG31 2342 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 RBFOX3A6NFN3 312 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 H3BMM0 161 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 J3QR89 54 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 OR2D3Q8NGH3 330 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 SRSF12Q8WXF0 261 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 MYO7AQ13402 2215 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 CD3DP04234 171 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 CT62P0C5K7 136 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 KLF9Q13886 244 aaPredicted RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 ADIRFQ15847 76 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 SIAH3Q8IW03 269 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 GDPD1Q8N9F7 314 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 MUS81Q96NY9 551 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 NPCDR1Q9BY65 106 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 SLC25A37Q9NYZ2 338 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 E7EQL1 145 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 AZU1P20160 251 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 MARCH11A6NNE9 402 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 UBE2AP49459 152 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 RPS27LQ71UM5 84 aaKnown RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 ZDHHC22Q8N966 263 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 BRWD1Q9NSI6 2320 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 OR2W5A6NFC9 320 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 A8MWL6 223 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 CXorf1O96002 111 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 GPX2P18283 190 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 DEFA5Q01523 94 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 DEFB112Q30KQ8 113 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 Q6AWC8 147 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 APCDD1LQ8NCL9 501 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 GLMPQ8WWB7 406 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 WIPF3A6NGB9 483 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 ICMTO60725 284 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 PATE4P0C8F1 98 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 IGLV3-21P80748 117 aaPredicted RBP2.76□□□□□ -1.97
LPP-220ENST00000617246 DEFA6Q01524 100 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 FMC1Q96HJ9 113 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 PRO3102Q9H379 93 aa2.76□□□□□ -1.97
LPP-220ENST00000617246 LY6G6EA0A0G2JKS1 128 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 OR10AC1Q8NH08 325 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 RNF138Q8WVD3 245 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ZNF778Q96MU6 729 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ANKRD60Q9BZ19 345 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 IL25Q9H293 177 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SLC2A9Q9NRM0 540 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 GEMIN2O14893 280 aaKnown RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 MT-ND4LP03901 98 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 DEFB130BP0DP73 79 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 DEFB130AP0DP74 79 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 RPL18AQ02543 176 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms