RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 TANC2Q9HCD6 1990 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 A0A1B0GXF2 115 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 CRXO43186 299 aaPredicted RBP12.72□□□□□ -0.37
GPN1-212ENST00000616939 RHOGP84095 191 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 TMEM30BQ3MIR4 351 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 IGKV1OR2-108A0A075B7D4 117 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 TRGV5A0A0B4J1U4 118 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 IGLL1P15814 213 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 GDF5OSQ5U4N7 250 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 LCN12Q6JVE5 192 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 Q6ZT83 130 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 NUP35Q8NFH5 326 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
GPN1-212ENST00000616939 J3QR06 171 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 PPBPP02775 128 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 MFAP2P55001 183 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.38
GPN1-212ENST00000616939 GUSBP1Q15486 140 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 C1orf229Q6ZS94 237 aaPredicted RBP12.71□□□□□ -0.38
GPN1-212ENST00000616939 CACNG8Q8WXS5 425 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 SLC25A2Q9BXI2 301 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 CLCF1Q9UBD9 225 aa12.71□□□□□ -0.38
GPN1-212ENST00000616939 SOX21Q9Y651 276 aaPredicted RBP12.71□□□□□ -0.38
GPN1-212ENST00000616939 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 INS-IGF2F8WCM5 200 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 LYZL6O75951 148 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 SAA2P0DJI9 122 aaPredicted RBP12.7□□□□□ -0.38
GPN1-212ENST00000616939 UBE2L3P68036 154 aaKnown RBP12.7□□□□□ -0.38
GPN1-212ENST00000616939 CD69Q07108 199 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 MAJINQ3KP22 176 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 LINC00696Q6ZRV3 163 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 ATOH7Q8N100 152 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 ZNF596Q8TC21 504 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 TMEM70Q9BUB7 260 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 C7orf69Q9H7B7 122 aa12.7□□□□□ -0.38
GPN1-212ENST00000616939 PEX7O00628 323 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 RNASE2P10153 161 aaKnown RBP12.69□□□□□ -0.38
GPN1-212ENST00000616939 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
GPN1-212ENST00000616939 CD46P15529 392 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 C17orf58Q2M2W7 97 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 FAM168AQ92567 244 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 CHCHD1Q96BP2 118 aaKnown RBP12.69□□□□□ -0.38
GPN1-212ENST00000616939 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 CEP290O15078 2479 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 IGLV1-44P01699 117 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 COL8A2P25067 703 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 HOXC12P31275 282 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 Q56UQ5 140 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 CT83Q5H943 113 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 FAM120AOSQ5T036 256 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 ZNF329Q86UD4 541 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 OR4C5Q8NGB2 326 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 OR1L4Q8NGR5 311 aa12.69□□□□□ -0.38
GPN1-212ENST00000616939 SNRNP40Q96DI7 357 aaKnown RBP12.69□□□□□ -0.38
GPN1-212ENST00000616939 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
GPN1-212ENST00000616939 CA7P43166 264 aa12.68□□□□□ -0.38
GPN1-212ENST00000616939 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
GPN1-212ENST00000616939 NHLRC2Q8NBF2 726 aa12.68□□□□□ -0.38
GPN1-212ENST00000616939 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
GPN1-212ENST00000616939 DEFB127Q9H1M4 99 aa12.68□□□□□ -0.38
GPN1-212ENST00000616939 TEX50A0A1B0GTY4 177 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 PATE3B3GLJ2 98 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 C9orf172C9J069 976 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 DLL1O00548 723 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
GPN1-212ENST00000616939 HLA-DRB1P01911 266 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 CECR9P0C854 216 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 TDHQ8IZJ6 230 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 URB1-AS1Q96HZ7 61 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 SSBP3Q9BWW4 388 aaPredicted RBP12.67□□□□□ -0.38
GPN1-212ENST00000616939 KBTBD11-OT1A0A1B0GTJ5 212 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 MYCNOSP40205 109 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 OR9G1Q8NH87 305 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 HINT2Q9BX68 163 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 ZNF355PQ9NSJ1 428 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
GPN1-212ENST00000616939 SZT2Q5T011 3432 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 MYOD1P15172 320 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 BPIFB3P59826 476 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 RPL8P62917 257 aaKnown RBP12.66□□□□□ -0.38
GPN1-212ENST00000616939 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 MOB3BQ86TA1 216 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 FAM169BQ8N8A8 192 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
GPN1-212ENST00000616939 OR4C46A6NHA9 309 aa12.65□□□□□ -0.38
GPN1-212ENST00000616939 OR5AL1P0C617 328 aa12.65□□□□□ -0.38
GPN1-212ENST00000616939 GATA2P23769 480 aaPredicted RBP12.65□□□□□ -0.38
GPN1-212ENST00000616939 HBBP68871 147 aa12.65□□□□□ -0.38
GPN1-212ENST00000616939 MAFAQ8NHW3 353 aaPredicted RBP12.65□□□□□ -0.38
GPN1-212ENST00000616939 FAM222BQ8WU58 562 aa12.65□□□□□ -0.38
GPN1-212ENST00000616939 LOXL4Q96JB6 756 aa12.65□□□□□ -0.38
GPN1-212ENST00000616939 KLF12Q9Y4X4 402 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms