RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 LSM10Q969L4 123 aaKnown RBP9.38□□□□□ -0.91
PCDHGA9-202ENST00000616887 PINX1Q96BK5 328 aaKnown RBP9.38□□□□□ -0.91
PCDHGA9-202ENST00000616887 NEIL1Q96FI4 390 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA9-202ENST00000616887 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
PCDHGA9-202ENST00000616887 TACC2O95359 2948 aa9.38□□□□□ -0.91
PCDHGA9-202ENST00000616887 SPINT2O43291 252 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 OR4C12Q96R67 309 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 PSENENQ9NZ42 101 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 MRPS16Q9Y3D3 137 aaKnown RBP9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 COL12A1Q99715 3063 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 RAI1Q7Z5J4 1906 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 MGST3O14880 152 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 PMCHP20382 165 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 CFHR2P36980 270 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 AMTP48728 403 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 LOXL3P58215 753 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 MZT1Q08AG7 82 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 LY6DQ14210 128 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 PRR27Q6MZM9 219 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 TCTEX1D1Q8N7M0 179 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 ZNF114Q8NC26 417 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 DERL1Q9BUN8 251 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 CSMD1Q96PZ7 3565 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 ABCA4P78363 2273 aa9.37□□□□□ -0.91
PCDHGA9-202ENST00000616887 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 RNF212BA8MTL3 300 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 C17orf58Q2M2W7 97 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 OR4A47Q6IF82 309 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 Q8TCH9 128 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 WDR61Q9GZS3 305 aaKnown RBP9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 RNF7Q9UBF6 113 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 IGLC7A0M8Q6 106 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 RBFOX2O43251 390 aaKnown RBP eCLIP9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 ZNF253O75346 499 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 CLDN14O95500 239 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 FRMD6-AS1P0C7T7 363 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 P0C879 139 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 C3orf36Q3SXR2 165 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 STUMQ69YW2 141 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 SSX8Q7RTT4 187 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 ST6GALNAC3Q8NDV1 305 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 GAFA1Q96PS6 74 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 IFI27L2Q9H2X8 130 aa9.36□□□□□ -0.91
PCDHGA9-202ENST00000616887 ASH1LQ9NR48 2969 aaKnown RBP9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 IGHV2-26A0A0B4J1V2 119 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 TRGV8A0A0C4DH27 118 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 IGHV1-69-2A0A0G2JMI3 117 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 FCN1O00602 326 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 ZG16O60844 167 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 FCGR3BO75015 233 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 FCN3O75636 299 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 SLC25A6P12236 298 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 DEFA4P12838 97 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 GATA4P43694 442 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 GPR12P47775 334 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 CDC34P49427 236 aaPredicted RBP9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 THBS3P49746 956 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 SELENOVP59797 346 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 ZNF90Q03938 601 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 ACSM6Q6P461 480 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 MEGF9Q9H1U4 602 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 JKAMPQ9P055 326 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 DYSFO75923 2080 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 M0R1X1 148 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 RBMXL2O75526 392 aaKnown RBP9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 NDUFB4O95168 129 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 CD99P14209 185 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 RHOGP84095 191 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 HTD2P86397 168 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 CATR1Q13166 79 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 GNB4Q9HAV0 340 aa9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
PCDHGA9-202ENST00000616887 MDFIC2A0A1B0GVS7 189 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 K7ERU9 68 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 TMPRSS2O15393 492 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 OR9G9P0C7N8 305 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 DUTP33316 252 aaKnown RBP9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 IER3P46695 156 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 GNB1P62873 340 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 CDSNQ15517 529 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 NUP37Q8NFH4 326 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 ZFYVE26Q68DK2 2539 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 CTXND1A0A1B0GTU2 59 aa9.34□□□□□ -0.91
PCDHGA9-202ENST00000616887 LRRC30A6NM36 301 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms