RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 OR1L1Q8NH94 360 aa12.71□□□□□ -0.38
NOP56-220ENST00000616692 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 A0A1B0GTH9 108 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 LRRC30A6NM36 301 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 CSN3P07498 182 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 IFITM1P13164 125 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 FNDC7Q5VTL7 733 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 TMEM252Q8N6L7 170 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 OR1L8Q8NGR8 309 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 ST8SIA1Q92185 356 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
NOP56-220ENST00000616692 TMEM191AQ9H0A3 160 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 CRYM-AS1A6NIL9 109 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 PHF1O43189 567 aaPredicted RBP12.7□□□□□ -0.38
NOP56-220ENST00000616692 HSBP1O75506 76 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 CELA2AP08217 269 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 IGFL2Q6UWQ7 119 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 OR10G8Q8NGN5 311 aa12.7□□□□□ -0.38
NOP56-220ENST00000616692 SNRNP40Q96DI7 357 aaKnown RBP12.7□□□□□ -0.38
NOP56-220ENST00000616692 ANGPTL7O43827 346 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 ORM1P02763 201 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 MYBPHQ13203 477 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 TESK1Q15569 626 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 TECRQ9NZ01 308 aaKnown RBP12.69□□□□□ -0.38
NOP56-220ENST00000616692 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 USP9XQ93008 2570 aaPredicted RBP12.69□□□□□ -0.38
NOP56-220ENST00000616692 TMEM150CB9EJG8 249 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 J3QLI3 93 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
NOP56-220ENST00000616692 FOLR3P41439 243 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 SRSF2Q01130 221 aaKnown RBP12.69□□□□□ -0.38
NOP56-220ENST00000616692 PFN4Q8NHR9 129 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 PRELID3AQ96N28 172 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 BPIFA1Q9NP55 256 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 OR2W1Q9Y3N9 320 aa12.69□□□□□ -0.38
NOP56-220ENST00000616692 A0A1W2PP11 408 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 RS1O15537 224 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 ZNF141Q15928 474 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 SLC35E4Q6ICL7 350 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 ZNF286AQ9HBT8 521 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 C20orf141Q9NUB4 165 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 IGLV3-16A0A075B6K0 115 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.68□□□□□ -0.38
NOP56-220ENST00000616692 C9JAW5 83 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 C8orf89P0DMQ9 161 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 SHISA5Q8N114 240 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 FLYWCH2Q96CP2 140 aaKnown RBP12.68□□□□□ -0.38
NOP56-220ENST00000616692 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
NOP56-220ENST00000616692 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 FAM90A26D6RGX4 464 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 FAM106CPP0CH98 169 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 PRR30Q53SZ7 412 aaPredicted RBP12.67□□□□□ -0.38
NOP56-220ENST00000616692 OR6K6Q8NGW6 343 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 LHX4Q969G2 390 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 CST7O76096 145 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 HIST2H2BCQ6DN03 193 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 KIR3DL3Q8N743 410 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
NOP56-220ENST00000616692 SMIM13P0DJ93 91 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 AMY2BP19961 511 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 ECI1P42126 302 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 GAGE2BQ13066 116 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 GAGE13Q4V321 117 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 GAGE2EQ4V326 116 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 MRPL14Q6P1L8 145 aaKnown RBP12.66□□□□□ -0.38
NOP56-220ENST00000616692 PRSS41Q7RTY9 318 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 TMEM116Q8NCL8 245 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 GAGE2DQ9UEU5 116 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 SLC25A5P05141 298 aaKnown RBP12.66□□□□□ -0.38
NOP56-220ENST00000616692 ATP1B2P14415 290 aaPredicted RBP12.66□□□□□ -0.38
NOP56-220ENST00000616692 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
NOP56-220ENST00000616692 SLC35B1P78383 322 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 KIR2DL4Q99706 377 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 PRO0461Q9UI25 63 aa12.66□□□□□ -0.38
NOP56-220ENST00000616692 TRBV5-4A0A0C4DH59 114 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 MBD3L4A6NDZ8 208 aaPredicted RBP12.65□□□□□ -0.38
NOP56-220ENST00000616692 MBD3L3A6NE82 208 aaPredicted RBP12.65□□□□□ -0.38
NOP56-220ENST00000616692 MBD3L5A6NJ08 208 aaPredicted RBP12.65□□□□□ -0.38
NOP56-220ENST00000616692 BMPR1BO00238 502 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 FRMD6-AS1P0C7T7 363 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 HSD17B10Q99714 261 aaKnown RBP12.65□□□□□ -0.38
NOP56-220ENST00000616692 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 ATG10Q9H0Y0 220 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 A1L4Q6 167 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 SP1P08047 785 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 C1orf100Q5SVJ3 147 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 FAM69BQ5VUD6 431 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 PPP1R32Q7Z5V6 425 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 LINC01587Q99440 93 aa12.65□□□□□ -0.38
NOP56-220ENST00000616692 PRTFDC1Q9NRG1 225 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms