RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SARAFQ96BY9 339 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 BDP1A6H8Y1 2624 aa11.08□□□□□ -0.64
PCDHA11-202ENST00000616325 TRAV3A0A0B4J244 114 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 GAGE10A6NGK3 116 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 TAX1BP3O14907 124 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 LINC00869P0C866 280 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 GPR12P47775 334 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 Q6ZR03 302 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 OR4F17Q8NGA8 305 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 OR5B3Q8NH48 314 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 RAB37Q96AX2 223 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 MED13LQ71F56 2210 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 FBLL1A6NHQ2 334 aaKnown RBP11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 WISP2O76076 250 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 ZNF138P52744 262 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 MRPL49Q13405 166 aaKnown RBP11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 RAB31Q13636 194 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 FAM201AQ5SY85 155 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 MUC15Q8N387 334 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 SPENQ96T58 3664 aaKnown RBP11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 TRAV8-6A0A0B4J262 113 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 AHRRA9YTQ3 701 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 IGFBP2P18065 325 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 SLC25A34Q6PIV7 304 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 TRIB1Q96RU8 372 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 ACACAQ13085 2346 aa11.07□□□□□ -0.64
PCDHA11-202ENST00000616325 TRBV9A0A0B4J1U6 114 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 SPATA12Q7Z6I5 190 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 MOB3BQ86TA1 216 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 TMEM70Q9BUB7 260 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 IGHV3-48P01763 117 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 HCFC1P51610 2035 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 TACC2O95359 2948 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 CACNA1BQ00975 2339 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 PPBPP02775 128 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 OPRK1P41145 380 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 DHRS13Q6UX07 377 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 SPACA3Q8IXA5 215 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 TMEM45BQ96B21 275 aa11.06□□□□□ -0.64
PCDHA11-202ENST00000616325 MMP23AO75900 390 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 BRWD1-AS2P59051 145 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 ZNF718Q3SXZ3 478 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 PNKDQ8N490 385 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 Q8N7P7 452 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 ZNRF1Q8ND25 227 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 OR2Z1Q8NG97 314 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 ENY2Q9NPA8 101 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 CORTO00230 105 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 NTN3O00634 580 aaPredicted RBP11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 GNG7O60262 68 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 ERVK-16P61578 105 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 TEPPQ6URK8 271 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 KLF14Q8TD94 323 aaPredicted RBP11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 NPVFQ9HCQ7 196 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 KALRNO60229 2985 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 SMPD2O60906 423 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 MORN2Q502X0 79 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 BVES-AS1Q5T3Y7 98 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 ARRDC1-AS1Q9H2J1 176 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
PCDHA11-202ENST00000616325 PCNX2A6NKB5 2137 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 RPL24P83731 157 aaKnown RBP11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 LHFPL4Q7Z7J7 247 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 HILPDAQ9Y5L2 63 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 TRAV9-1A0A075B6T8 112 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 TRGV10A0A0A0MS01 117 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 RNFT1Q5M7Z0 435 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 UTF1Q5T230 341 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 MOB1BQ7L9L4 216 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 COQ2Q96H96 371 aa11.04□□□□□ -0.64
PCDHA11-202ENST00000616325 C9orf172C9J069 976 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 MLANAQ16655 118 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 TMEM116Q8NCL8 245 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 LRRC29Q8WV35 223 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 RAB1CQ92928 201 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 TXNDC17Q9BRA2 123 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 KMT2EQ8IZD2 1858 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 LEPROTL1O95214 131 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 C7orf71A4D174 169 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 SPINT2O43291 252 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 PKIBQ9C010 78 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 SAP30LQ9HAJ7 183 aa11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 TNRC18O15417 2968 aaPredicted RBP11.03□□□□□ -0.64
PCDHA11-202ENST00000616325 IGKV3D-15A0A087WSY6 115 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 OOEPA6NGQ2 149 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 PLAUP00749 431 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 VWC2Q2TAL6 325 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 C12orf54Q6X4T0 127 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 TCF24Q7RTU0 167 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 LINC00470Q9BZP3 86 aa11.02□□□□□ -0.64
PCDHA11-202ENST00000616325 TRAV5A0A0B4J249 113 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 CCL11P51671 97 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms