RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ZNF430Q9H8G1 570 aaPredicted RBP5.51□□□□□ -1.53
LMO3-235ENST00000616247 OSTCQ9NRP0 149 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 BOKQ9UMX3 212 aaPredicted RBP5.51□□□□□ -1.53
LMO3-235ENST00000616247 LOXL2Q9Y4K0 774 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 IGHV3OR15-7A0A075B7D8 119 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 GGTLC3B5MD39 225 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 C9JCJ5 164 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 DNPH1O43598 174 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 GNG5P63218 68 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 COX19Q49B96 90 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 C1orf185Q5T7R7 199 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 MRPL14Q6P1L8 145 aaKnown RBP5.51□□□□□ -1.53
LMO3-235ENST00000616247 OR9G1Q8NH87 305 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 OR2V2Q96R30 315 aa5.51□□□□□ -1.53
LMO3-235ENST00000616247 AMMECR1Q9Y4X0 333 aaPredicted RBP5.51□□□□□ -1.53
LMO3-235ENST00000616247 TRAV8-6A0A0B4J262 113 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 C7orf71A4D174 169 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 TAX1BP3O14907 124 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 DKK1O94907 266 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 IGLV3-19P01714 112 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 EPHA8P29322 1005 aaPredicted RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 VWC2Q2TAL6 325 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 LRRC10Q5BKY1 277 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 TMEM164Q5U3C3 297 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 BPIFA4PQ86YQ2 179 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 MUC15Q8N387 334 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 Q8N7P7 452 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 NUP35Q8NFH5 326 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 B4GALT7Q9UBV7 327 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 H3BUT2 72 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 GNG7O60262 68 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 COX7A2P2O60397 106 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 AGFG2O95081 481 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 SLC25A5P05141 298 aaKnown RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 BVES-AS1Q5T3Y7 98 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 ABHD17BQ5VST6 288 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 CNEP1R1Q8N9A8 125 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 SARAFQ96BY9 339 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 SNRNP40Q96DI7 357 aaKnown RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 COQ2Q96H96 371 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 MAP1LC3CQ9BXW4 147 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 CSTL1Q9H114 145 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 MBNL3Q9NUK0 354 aaKnown RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 ZNF835Q9Y2P0 537 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 WNK2Q9Y3S1 2297 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 NPIPB11E5RHQ5 1161 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 J3QR06 171 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 ISLRO14498 428 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 APELAP0DMC3 54 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 CD46P15529 392 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 ORM2P19652 201 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 HTR1DP28221 377 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 DUTP33316 252 aaKnown RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 TBR1Q16650 682 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 SPATA12Q7Z6I5 190 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 RBMXL3Q8N7X1 1067 aaKnown RBP5.5□□□□□ -1.53
LMO3-235ENST00000616247 OR4F17Q8NGA8 305 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 OR8A1Q8NGG7 326 aa5.5□□□□□ -1.53
LMO3-235ENST00000616247 PKDREJQ9NTG1 2253 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 DYSFO75923 2080 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 SMPD2O60906 423 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 AREGP15514 252 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 HOXC12P31275 282 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 ARF6P62330 175 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 NHLH1Q02575 133 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 LRRC29Q8WV35 223 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 RND1Q92730 232 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 CDX2Q99626 313 aaPredicted RBP5.49□□□□□ -1.53
LMO3-235ENST00000616247 PEF1Q9UBV8 284 aaKnown RBP5.49□□□□□ -1.53
LMO3-235ENST00000616247 TRIOBPQ9H2D6 2365 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 IGHV3-21A0A0B4J1V1 117 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 LOC389332A0A1B0GUA5 103 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 KLF7O75840 302 aaPredicted RBP5.49□□□□□ -1.53
LMO3-235ENST00000616247 MMP23AO75900 390 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 GPR183P32249 361 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 KRTAP27-1Q3LI81 207 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 GDF5OSQ5U4N7 250 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 SLC35E4Q6ICL7 350 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 Q6ZR03 302 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 ZNRF1Q8ND25 227 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 FLYWCH2Q96CP2 140 aaKnown RBP5.49□□□□□ -1.53
LMO3-235ENST00000616247 SMIM12Q96EX1 92 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 LSM4Q9Y4Z0 139 aaKnown RBP5.49□□□□□ -1.53
LMO3-235ENST00000616247 OR51B2Q9Y5P1 312 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 F11RQ9Y624 299 aaKnown RBP5.49□□□□□ -1.53
LMO3-235ENST00000616247 PLXNB1O43157 2135 aa5.49□□□□□ -1.53
LMO3-235ENST00000616247 A0A1W2PRE2 83 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 FAM231BA6NCW3 169 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 OR5AL1P0C617 328 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 C8orf88P0DMB2 117 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 MPV17P39210 176 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 HSPE1P61604 102 aaKnown RBP5.48□□□□□ -1.53
LMO3-235ENST00000616247 BHLHA15Q7RTS1 189 aaPredicted RBP5.48□□□□□ -1.53
LMO3-235ENST00000616247 HCFC1P51610 2035 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 SAA2-SAA4A0A096LPE2 208 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 SERTM2A0A1B0GWG4 89 aa5.48□□□□□ -1.53
LMO3-235ENST00000616247 H0YJW9 148 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms