RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RUNX1Q01196 453 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
TCF4-248ENST00000616053 FUNDC1Q8IVP5 155 aa10.66□□□□□ -0.7
TCF4-248ENST00000616053 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 CIARTQ8N365 385 aaPredicted RBP10.65□□□□□ -0.7
TCF4-248ENST00000616053 SAP25Q8TEE9 199 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 GPR146Q96CH1 333 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 FMC1Q96HJ9 113 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 NCR2O95944 276 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.7
TCF4-248ENST00000616053 IGKV1OR2-108A0A075B7D4 117 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 C17orf100A8MU93 164 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 HRKO00198 91 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 EFNA4P52798 201 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 C5orf47Q569G3 176 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 FAM201AQ5SY85 155 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 TMEM144Q7Z5S9 345 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 GATAD1Q8WUU5 269 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 IMMP1LQ96LU5 166 aa10.65□□□□□ -0.7
TCF4-248ENST00000616053 TRBV5-4A0A0C4DH59 114 aa10.65□□□□□ -0.71
TCF4-248ENST00000616053 CD160O95971 181 aa10.65□□□□□ -0.71
TCF4-248ENST00000616053 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.71
TCF4-248ENST00000616053 IGHG3P01860 377 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 FUT5Q11128 374 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 VN1R4Q7Z5H5 301 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 E9PLN8 166 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 NAT1P18440 290 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 SPNP16150 400 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 BRD3OSQ6XYD6 125 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 ZNF721Q8TF20 911 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 CHTOPQ9Y3Y2 248 aaKnown RBP10.64□□□□□ -0.71
TCF4-248ENST00000616053 SLX4Q8IY92 1834 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 KIDINS220Q9ULH0 1771 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 CD300EQ496F6 205 aaPredicted RBP10.64□□□□□ -0.71
TCF4-248ENST00000616053 LYNX1G3V0Z9 82 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 LYNX1P0DP58 116 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 CFHR5Q9BXR6 569 aa10.64□□□□□ -0.71
TCF4-248ENST00000616053 ATP5IP56385 69 aaPredicted RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 SSBP2P81877 361 aaPredicted RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 OR52E5Q8NH55 327 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 GPHB5Q86YW7 130 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 C17orf47Q8NEP4 570 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 INSL4Q14641 139 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 IFI27L2Q9H2X8 130 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 MON2Q7Z3U7 1717 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 UBE2V2Q15819 145 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 TMEM155Q4W5P6 130 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 MAVSQ7Z434 540 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
TCF4-248ENST00000616053 PGLYRP1O75594 196 aaPredicted RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 RCC1P18754 421 aaPredicted RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 GATA2P23769 480 aaPredicted RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 PPIFP30405 207 aaKnown RBP10.63□□□□□ -0.71
TCF4-248ENST00000616053 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
TCF4-248ENST00000616053 ALX3O95076 343 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 TMEM258P61165 79 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 ZNF503Q96F45 646 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 Q9H3A6 140 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 SMDT1Q9H4I9 107 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 F8VVB4 439 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 F8VWA3 439 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 COQ2Q96H96 371 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 MGST2Q99735 147 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 CECR9P0C854 216 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 PGFP49763 221 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 ZNF79Q15937 498 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 TMEM238C9JI98 176 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 PHIPQ8WWQ0 1821 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 CSRP1P21291 193 aaKnown RBP10.62□□□□□ -0.71
TCF4-248ENST00000616053 Q6AWC8 147 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 UPK2O00526 184 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 C1QL1O75973 258 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 CRYBB2P43320 205 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 VMO1Q7Z5L0 202 aa10.62□□□□□ -0.71
TCF4-248ENST00000616053 IFT22Q9H7X7 185 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 OR9G9P0C7N8 305 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 MAPK1IP1LQ8NDC0 245 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 COX6A1P12074 109 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 TNFRSF12AQ9NP84 129 aa10.61□□□□□ -0.71
TCF4-248ENST00000616053 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
TCF4-248ENST00000616053 C2orf68Q2NKX9 166 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 LILRA6Q6PI73 481 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 PKDREJQ9NTG1 2253 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 GDF15Q99988 308 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 TRBV9A0A0B4J1U6 114 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 AGAP20933 346 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 CCL18P55774 89 aa10.6□□□□□ -0.71
TCF4-248ENST00000616053 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms