RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 M0R381 172 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 NPPCP23582 126 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 UBE2V1Q13404 147 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 SHISA5Q8N114 240 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 UMODP07911 640 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 PF4V1P10720 104 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 HGFACQ04756 655 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 TSKUQ8WUA8 353 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 AGMATQ9BSE5 352 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 UBTD1Q9HAC8 227 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 SHANK3Q9BYB0 1731 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 KBTBD11-OT1A0A1B0GTJ5 212 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 A8MWP6 167 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 SFTPCP11686 197 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 ZNF497Q6ZNH5 498 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 OTORQ9NRC9 128 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 POLR2AP24928 1970 aaKnown RBP15.78■□□□□ 0.12
SPAST-203ENST00000615843 HEATR5BQ9P2D3 2071 aa15.78■□□□□ 0.12
SPAST-203ENST00000615843 PYYP10082 97 aa15.77■□□□□ 0.12
SPAST-203ENST00000615843 TRAV8-2A0A0B4J237 113 aa15.77■□□□□ 0.12
SPAST-203ENST00000615843 DNAL4O96015 105 aa15.77■□□□□ 0.12
SPAST-203ENST00000615843 CRIM1Q9NZV1 1036 aa15.77■□□□□ 0.12
SPAST-203ENST00000615843 Q6ZT83 130 aa15.77■□□□□ 0.11
SPAST-203ENST00000615843 AHCTF1Q8WYP5 2266 aa15.77■□□□□ 0.11
SPAST-203ENST00000615843 NYNRINQ9P2P1 1898 aaKnown RBP15.77■□□□□ 0.11
SPAST-203ENST00000615843 IGKV1-12A0A0C4DH73 117 aa15.77■□□□□ 0.11
SPAST-203ENST00000615843 C9JQL5 133 aa15.77■□□□□ 0.11
SPAST-203ENST00000615843 IGKV1D-12P01611 117 aa15.77■□□□□ 0.11
SPAST-203ENST00000615843 NUDT10Q8NFP7 164 aa15.77■□□□□ 0.11
SPAST-203ENST00000615843 SAP25Q8TEE9 199 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 TIMP4Q99727 224 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 A0A1W2PR77 199 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 PSG7Q13046 419 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 SFTA2Q6UW10 78 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 ATP5L2Q7Z4Y8 100 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 TMEM171Q8WVE6 324 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 ANAPC13Q9BS18 74 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 FOXA2Q9Y261 457 aaPredicted RBP15.76■□□□□ 0.11
SPAST-203ENST00000615843 PPP1R17O96001 155 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 NMSQ5H8A3 153 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 SAMD5Q5TGI4 173 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 TDRD6O60522 2096 aaKnown RBP15.76■□□□□ 0.11
SPAST-203ENST00000615843 UPK2O00526 184 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 UBE2L6O14933 153 aa15.76■□□□□ 0.11
SPAST-203ENST00000615843 IGHV3OR16-13A0A075B7E8 117 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 IGHV3-74A0A0B4J1X5 117 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 TM4SF5O14894 197 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 RNASE1P07998 156 aaKnown RBP15.75■□□□□ 0.11
SPAST-203ENST00000615843 TEX29Q8N6K0 151 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 MRPL20Q9BYC9 149 aaKnown RBP15.75■□□□□ 0.11
SPAST-203ENST00000615843 PILRBQ9UKJ0 227 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 IGHV2-70P01814 119 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 DOCK4Q8N1I0 1966 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 OR9G9P0C7N8 305 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 C3orf79P0CE67 100 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 ZNF585BQ52M93 769 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 FAM159AQ6UWV7 190 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 ZNF479Q96JC4 524 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 DPM2O94777 84 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 SAA1P0DJI8 122 aaPredicted RBP15.75■□□□□ 0.11
SPAST-203ENST00000615843 TREML4Q6UXN2 200 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 FLVCR1-AS1Q8TAF5 88 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 MRAP2Q96G30 205 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 COQ2Q96H96 371 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 FBXL15Q9H469 300 aa15.75■□□□□ 0.11
SPAST-203ENST00000615843 CELA3AP09093 270 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 CD33P20138 364 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 PPP1R32Q7Z5V6 425 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 S4R3C0 116 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 C9JCJ5 164 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 FAM201AQ5SY85 155 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 LCN12Q6JVE5 192 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 FAM216BQ8N7L0 139 aa15.74■□□□□ 0.11
SPAST-203ENST00000615843 ASIPP42127 132 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 ATP5G2Q06055 141 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 NAA38Q9BRA0 125 aaKnown RBP15.73■□□□□ 0.11
SPAST-203ENST00000615843 MRPS16Q9Y3D3 137 aaKnown RBP15.73■□□□□ 0.11
SPAST-203ENST00000615843 RTTNQ86VV8 2226 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 SAA2-SAA4A0A096LPE2 208 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 YPEL1O60688 119 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 CECR9P0C854 216 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 SAA2P0DJI9 122 aaPredicted RBP15.73■□□□□ 0.11
SPAST-203ENST00000615843 SRSF7Q16629 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPAST-203ENST00000615843 MPV17L2Q567V2 206 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 YPEL2Q96QA6 119 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 GGTLC1Q9BX51 225 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 GP6Q9HCN6 339 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 PATJQ8NI35 1801 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 OR9G4Q8NGQ1 327 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 CHD5Q8TDI0 1954 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 TPTE2P1Q5T6R2 138 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 FAM90A2PQ658T7 463 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 RTN4RL2Q86UN3 420 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 A0A0G2JMZ2 1700 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 LRRC37A2A6NM11 1700 aa15.73■□□□□ 0.11
SPAST-203ENST00000615843 DDB2Q92466 427 aa15.72■□□□□ 0.11
SPAST-203ENST00000615843 EEF1AKMT3Q96AZ1 226 aa15.72■□□□□ 0.11
SPAST-203ENST00000615843 MTCL1Q9Y4B5 1905 aaKnown RBP15.72■□□□□ 0.11
SPAST-203ENST00000615843 IQCF6A8MYZ5 107 aa15.72■□□□□ 0.11
SPAST-203ENST00000615843 GLRXP35754 106 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms