RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
CNTNAP3B-211ENST00000612828 V9GYH0 126 aa9.24□□□□□ -0.93
CNTNAP3B-211ENST00000612828 GCM2O75603 506 aaPredicted RBP9.24□□□□□ -0.93
CNTNAP3B-211ENST00000612828 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
CNTNAP3B-211ENST00000612828 SOCS3O14543 225 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 PROP1O75360 226 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 IGHG4P01861 327 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 GFERP55789 205 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 KIR3DX1Q9H7L2 352 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 PLXNB1O43157 2135 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 LRRK1Q38SD2 2015 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 C21orf140B9A014 251 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 PLA2G10O15496 165 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 MORN3Q6PF18 240 aaPredicted RBP9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ZNF479Q96JC4 524 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 CENPVL3A0A0U1RRI6 287 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 UNC119Q13432 240 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 SHISA5Q8N114 240 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ADAD2Q8NCV1 583 aaKnown RBP9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 CDC42EP2O14613 210 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 TFF2Q03403 129 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 VAX2Q9UIW0 290 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 N4BP2Q86UW6 1770 aaPredicted RBP9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 HMSDA8MTL9 139 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ZNF79Q15937 498 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 PNKDQ8N490 385 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 RPRMQ9NS64 109 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ZNF257Q9Y2Q1 563 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ST3GAL2Q16842 350 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 BRK1Q8WUW1 75 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 MTCH2Q9Y6C9 303 aa9.23□□□□□ -0.93
CNTNAP3B-211ENST00000612828 PRRC2AP48634 2157 aaKnown RBP9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 H3BUT2 72 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 CD300EQ496F6 205 aaPredicted RBP9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 BCORQ6W2J9 1755 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 SSBP2P81877 361 aaPredicted RBP9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 MRPL14Q6P1L8 145 aaKnown RBP9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 PAX8Q06710 450 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 LAIR2Q6ISS4 152 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 CD177Q8N6Q3 437 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ST8SIA1Q92185 356 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 SSC5DA1L4H1 1573 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 A8MWV9 139 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 BCL2P10415 239 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 HMGA2P52926 109 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ZP1P60852 638 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 SMIM4Q8WVI0 70 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 TAF15Q92804 592 aaKnown RBP eCLIP9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 SMIM19Q96E16 107 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 C11orf87Q6NUJ2 197 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 UBE2D4Q9Y2X8 147 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 CLDND2Q8NHS1 167 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 LRP12Q9Y561 859 aa9.22□□□□□ -0.93
CNTNAP3B-211ENST00000612828 DDX60Q8IY21 1712 aaKnown RBP9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 WISP3O95389 354 aaPredicted RBP9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 RPS20P60866 119 aaKnown RBP9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 IGLV3-16A0A075B6K0 115 aa9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 FGF9P31371 208 aaPredicted RBP9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 UBE2AP49459 152 aa9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 LINC01555Q8NAE3 123 aa9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 GTSF1Q8WW33 167 aa9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 E9PQ18 207 aa9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 ZNF503Q96F45 646 aa9.21□□□□□ -0.93
CNTNAP3B-211ENST00000612828 CXCL3P19876 107 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 LINC00527Q9UJ94 153 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MAST2Q6P0Q8 1798 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CD24P25063 80 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 EGR3Q06889 387 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ARL14EPLP0DKL9 152 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 DPTQ07507 201 aa9.21□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NPIPB11E5RHQ5 1161 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 NHLRC3Q5JS37 347 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PRSS41Q7RTY9 318 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SYS1Q8N2H4 156 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 GVQW1Q8N7I0 195 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 ARIH2OSQ8N7S6 290 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 UQCR10Q9UDW1 63 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 A0A0A6YYD5 115 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGKV1D-33P01593 117 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 IGKV1-33P01594 117 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PIGYQ3MUY2 71 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 SAXO1Q8IYX7 474 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 C16orf52Q8NHV5 167 aa9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 RPP21Q9H633 154 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MBD3L4A6NDZ8 208 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MBD3L3A6NE82 208 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 MBD3L5A6NJ08 208 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP3B-211ENST00000612828 PRYO14603 147 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms