RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 FAM103A1Q9BTL3 118 aaKnown RBP5.24□□□□□ -1.57
SNX13-213ENST00000611725 THYN1Q9P016 225 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 FER1L5A0AVI2 2057 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 SCO2A0A1W2PP80 73 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 PFN1P07737 140 aaKnown RBP5.24□□□□□ -1.57
SNX13-213ENST00000611725 MYOD1P15172 320 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 APOBEC3AP31941 199 aaPredicted RBP5.24□□□□□ -1.57
SNX13-213ENST00000611725 CENPWQ5EE01 88 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 ZNF705AQ6ZN79 300 aaPredicted RBP5.24□□□□□ -1.57
SNX13-213ENST00000611725 OR8I2Q8N0Y5 310 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 OR4F17Q8NGA8 305 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 LINC01560Q8TB33 94 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 SONP18583 2426 aaKnown RBP5.24□□□□□ -1.57
SNX13-213ENST00000611725 TRBV23-1A0A0A0MS06 115 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 CBLN1P23435 193 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 CSN1S1P47710 185 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 GAFA1Q96PS6 74 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 CLEC7AQ9BXN2 247 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 BET1LQ9NYM9 111 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 WNK1Q9H4A3 2382 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 ARFGEF3Q5TH69 2177 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 C20orf202A1L168 122 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 SLC17A3O00476 420 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 MSMPQ1L6U9 139 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 RASL11BQ9BPW5 248 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 HLA-DQA1P01909 254 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 PPOXP50336 477 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 C2orf83Q53S99 150 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 ZNF600Q6ZNG1 722 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 SSX7Q7RTT5 188 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 OCC1Q8TAD7 63 aa5.24□□□□□ -1.57
SNX13-213ENST00000611725 MRPL32Q9BYC8 188 aaKnown RBP5.24□□□□□ -1.57
SNX13-213ENST00000611725 A0A1W2PRE2 83 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 GNG7O60262 68 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 GGCTO75223 188 aaKnown RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 MOSP00540 346 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 HTR1DP28221 377 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 ARF6P62330 175 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 SPACA3Q8IXA5 215 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 TMEM167AQ8TBQ9 72 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 HIST1H2BLQ99880 126 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 FOXA2Q9Y261 457 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 PTPRSQ13332 1948 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 GRIFINA4D1Z8 144 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 PGPA6NDG6 321 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 CHEK1O14757 476 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 HIST1H1EP10412 219 aaKnown RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 DDTP30046 118 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 S100A7P31151 101 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 GPR6P46095 362 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 SPATA31B1PQ5VZV4 182 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 DUX4L9Q6RFH8 374 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 HIST3H2BBQ8N257 126 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 VKORC1Q9BQB6 163 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 POLQO75417 2590 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 GPX4P36969 197 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 LOXL3P58215 753 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 FXYD3Q14802 87 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 ODF3L1Q8IXM7 274 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 FAM222BQ8WU58 562 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 PCNX3Q9H6A9 2034 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 NCBP2LA6PVI3 153 aaKnown RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 GCGP01275 180 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 SP5Q6BEB4 398 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 CENPVQ7Z7K6 275 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 ZNF295-AS1Q8N0V1 137 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 NOL4LQ96MY1 436 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 C5orf42Q9H799 3197 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 CEACAM4O75871 244 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 IGLV2-14P01704 120 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 REG1AP05451 166 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 PNKDQ8N490 385 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 OR10W1Q8NGF6 305 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 TMEM170AQ8WVE7 144 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 EAF1Q96JC9 268 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 WFIKKN1Q96NZ8 548 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 MGST2Q99735 147 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 SLC25A33Q9BSK2 321 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 SSBP3Q9BWW4 388 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 TMEM133Q9H2Q1 129 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 COL8A1P27658 744 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 COMPP49747 757 aaPredicted RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 PKIAP61925 76 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 SEM1Q6ZVN7 128 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 NUP37Q8NFH4 326 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 OR2T6Q8NHC8 308 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 ZCCHC14Q8WYQ9 949 aaKnown RBP5.23□□□□□ -1.57
SNX13-213ENST00000611725 IMMP2LQ96T52 175 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 MTORP42345 2549 aa5.23□□□□□ -1.57
SNX13-213ENST00000611725 TRIOO75962 3097 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 LYNX1G3V0Z9 82 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 H3BTX0 84 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 MMP23AO75900 390 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 SOD3P08294 240 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 LYNX1P0DP58 116 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 CCDC144NLQ6NUI1 221 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 OR1L6Q8NGR2 347 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 Q8TCH9 128 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 FBXL15Q9H469 300 aa5.22□□□□□ -1.57
SNX13-213ENST00000611725 PKD1L2Q7Z442 2459 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms