RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 MIXL1Q9H2W2 232 aa12.94□□□□□ -0.34
PRKN-208ENST00000610470 DNAH1Q9P2D7 4330 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 IGHV3OR16-8A0A075B7F1 116 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 OR4C46A6NHA9 309 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 GABARAPH6UMI1 98 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 YIF1AO95070 293 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 RAB3DO95716 219 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 IGKV1-5P01602 117 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 CD74P04233 296 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 APOC4P55056 127 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 MRPS10P82664 201 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 SSBP1Q04837 148 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 SLC35G3Q8N808 338 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 CCDC59Q9P031 241 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 IGHV7-4-1A0A0J9YVY3 117 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 GNG7O60262 68 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 B3GALNT1O75752 331 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 IFNA17P01571 189 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 CTSDP07339 412 aaPredicted RBP12.92□□□□□ -0.34
PRKN-208ENST00000610470 SNCAP37840 140 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 IZUMO4Q1ZYL8 232 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 STEAP1BQ6NZ63 245 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 OR4D10Q8NGI6 311 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 NXF2Q9GZY0 626 aaKnown RBP12.92□□□□□ -0.34
PRKN-208ENST00000610470 A0A0B4J293 547 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 INS-IGF2F8WCM5 200 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 P0C879 139 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 NPBWR1P48145 328 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 MEF2DQ14814 521 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 TMEM116Q8NCL8 245 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 DUSP18Q8NEJ0 188 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 OR13C8Q8NGS7 320 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 RRNAD1Q96FB5 475 aaKnown RBP12.91□□□□□ -0.34
PRKN-208ENST00000610470 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 TRAV14DV4A0A0A6YYC5 116 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 CORTO00230 105 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 UBE2CO00762 179 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 CHEK1O14757 476 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 ST8SIA3O43173 380 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 IGHV3-48P01763 117 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 UCP1P25874 307 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 SUB1P53999 127 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKN-208ENST00000610470 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 SP6Q3SY56 376 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 RNASE11Q8TAA1 199 aaKnown RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 RNF2Q99496 336 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 GINS3Q9BRX5 216 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 C6orf62Q9GZU0 229 aaPredicted RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 ENY2Q9NPA8 101 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 TP53TG1Q9Y2A0 90 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 JTBO76095 146 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 BMI1P35226 326 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 HOXA1P49639 335 aaPredicted RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 Q6ZWC4 215 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 RABL2AQ9UBK7 228 aaPredicted RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 RABL2BQ9UNT1 228 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5BA0A0G2JN68 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5BA0A0G2JPC4 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 ETV6P41212 452 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5AQ8N109 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 SMIM4Q8WVI0 70 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 GALNT14Q96FL9 552 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 DIRAS2Q96HU8 199 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 PLECQ15149 4684 aaKnown RBP12.88□□□□□ -0.35
PRKN-208ENST00000610470 IGHV3-49A0A0A0MS15 119 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 CTDSPLO15194 276 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 SPRY2O43597 315 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 CD5P06127 495 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 IL18Q14116 193 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 SURF2Q15527 256 aaPredicted RBP12.87□□□□□ -0.35
PRKN-208ENST00000610470 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 TOMM20LQ6UXN7 152 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 TEX13DA0A0J9YY54 714 aaPredicted RBP12.86□□□□□ -0.35
PRKN-208ENST00000610470 SCGB2A1O75556 95 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 CDS2O95674 445 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms