RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
LINC00240-203ENST00000606878 ADAMTSL5Q6ZMM2 481 aa12.57□□□□□ -0.4
LINC00240-203ENST00000606878 TMED4Q7Z7H5 227 aa12.57□□□□□ -0.4
LINC00240-203ENST00000606878 OR52E5Q8NH55 327 aa12.57□□□□□ -0.4
LINC00240-203ENST00000606878 TXN2Q99757 166 aa12.57□□□□□ -0.4
LINC00240-203ENST00000606878 CACFD1Q9UGQ2 172 aa12.57□□□□□ -0.4
LINC00240-203ENST00000606878 IGHV3-35A0A0C4DH35 117 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 I3L2K1 104 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
LINC00240-203ENST00000606878 SRPXP78539 464 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 DEFB114Q30KQ6 69 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 LGI3Q8N145 548 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
LINC00240-203ENST00000606878 CACNG5Q9UF02 275 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 UFC1Q9Y3C8 167 aa12.56□□□□□ -0.4
LINC00240-203ENST00000606878 NAP1L6A6NFF2 107 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 MT-CO2P00403 227 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 ELLP55199 621 aaPredicted RBP12.55□□□□□ -0.4
LINC00240-203ENST00000606878 SUPT4H1P63272 117 aaKnown RBP12.55□□□□□ -0.4
LINC00240-203ENST00000606878 BAK1Q16611 211 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
LINC00240-203ENST00000606878 AARDQ4LEZ3 155 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 Q8N1Y9 231 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 UXS1Q8NBZ7 420 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 MARC2Q969Z3 335 aa12.55□□□□□ -0.4
LINC00240-203ENST00000606878 ZNF436Q9C0F3 470 aaPredicted RBP12.55□□□□□ -0.4
LINC00240-203ENST00000606878 A0A0B4J2A0 478 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 TMEM213A2RRL7 107 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 IZUMO1RA6ND01 250 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 A8MWP6 167 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 NUPL2O15504 423 aaKnown RBP12.54□□□□□ -0.4
LINC00240-203ENST00000606878 CTSGP08311 255 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 SULT1A3P0DMM9 295 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 SULT1A4P0DMN0 295 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 FCGR2BP31994 310 aaPredicted RBP12.54□□□□□ -0.4
LINC00240-203ENST00000606878 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 DUSP18Q8NEJ0 188 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 CHRDL1Q9BU40 450 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 HEYLQ9NQ87 328 aaPredicted RBP12.54□□□□□ -0.4
LINC00240-203ENST00000606878 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 MRPL27Q9P0M9 148 aaKnown RBP12.54□□□□□ -0.4
LINC00240-203ENST00000606878 SHPKQ9UHJ6 478 aa12.54□□□□□ -0.4
LINC00240-203ENST00000606878 CENPXA8MT69 81 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 CEBPZOSA8MTT3 80 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
LINC00240-203ENST00000606878 CORTO00230 105 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 NDUFA4O00483 81 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
LINC00240-203ENST00000606878 ADMP35318 185 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 NPBWR1P48145 328 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 CCR6P51684 374 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 ASCL2Q99929 193 aa12.53□□□□□ -0.4
LINC00240-203ENST00000606878 LINC00854A0A1B0GVQ3 168 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 ZNF785A8K8V0 405 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 GNG7O60262 68 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 IGHV3-48P01763 117 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 C8orf88P0DMB2 117 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 EDN2P20800 178 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 VAMP1P23763 118 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 HTR2BP41595 481 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 RELQ04864 619 aaPredicted RBP12.52□□□□□ -0.41
LINC00240-203ENST00000606878 RBMS2Q15434 407 aaKnown RBP12.52□□□□□ -0.41
LINC00240-203ENST00000606878 GUCA2BQ16661 112 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 TMEM190Q8WZ59 177 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 C20orf24Q9BUV8 137 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.41
LINC00240-203ENST00000606878 K7EMT4 169 aa12.51□□□□□ -0.41
LINC00240-203ENST00000606878 FRMD6-AS1P0C7T7 363 aa12.51□□□□□ -0.41
LINC00240-203ENST00000606878 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
LINC00240-203ENST00000606878 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
LINC00240-203ENST00000606878 CENPSQ8N2Z9 138 aa12.51□□□□□ -0.41
LINC00240-203ENST00000606878 SDHCQ99643 169 aaPredicted RBP12.51□□□□□ -0.41
LINC00240-203ENST00000606878 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
LINC00240-203ENST00000606878 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
LINC00240-203ENST00000606878 A0A1B0GU03 582 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 DUXBA0A1W2PPF3 345 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 YIF1AO95070 293 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 SFT2D2O95562 160 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 IGHV4-30-4P0DP06 118 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 BSXQ3C1V8 233 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
LINC00240-203ENST00000606878 RBPMS2Q6ZRY4 209 aaKnown RBP12.5□□□□□ -0.41
LINC00240-203ENST00000606878 NOXA1Q86UR1 476 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 MLXQ9UH92 298 aa12.5□□□□□ -0.41
LINC00240-203ENST00000606878 TRAV25A0A0B4J276 109 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 A8MZ25 164 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 NDUFB6O95139 128 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 TMEM50AO95807 157 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 IL7P13232 177 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 OPRK1P41145 380 aa12.49□□□□□ -0.41
LINC00240-203ENST00000606878 UBE2MP61081 183 aaKnown RBP12.49□□□□□ -0.41
LINC00240-203ENST00000606878 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms