RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 PRR20CP86479 221 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 PRR20DP86480 221 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 PRR20BP86481 221 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 PRR20AP86496 221 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 PSG5Q15238 335 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 SLC16A13Q7RTY0 426 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 LINC00869P0C866 280 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 HTR1DP28221 377 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 ATP5G3P48201 142 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 PRSS8Q16651 343 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 FAM78BQ5VT40 261 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 ZNF343Q6P1L6 599 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 C19orf35Q6ZS72 473 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 LHFPL4Q7Z7J7 247 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 SLC35E1Q96K37 410 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 PARLQ9H300 379 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 FNDC4Q9H6D8 234 aaPredicted RBP12.1□□□□□ -0.47
CCDC12-211ENST00000604367 SDF2L1Q9HCN8 221 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 SLC45A2Q9UMX9 530 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
CCDC12-211ENST00000604367 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 TIMM23O14925 209 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 CD24P25063 80 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 RHOBP62745 196 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
CCDC12-211ENST00000604367 TMEM250H0YL14 139 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 FOXH1O75593 365 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 CXorf1O96002 111 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 ZFP36P26651 326 aaKnown RBP12.09□□□□□ -0.47
CCDC12-211ENST00000604367 PPP1R27Q86WC6 154 aa12.09□□□□□ -0.47
CCDC12-211ENST00000604367 A6NNC1 897 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 CRYGBP07316 175 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 AREGP15514 252 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 RPL27AP46776 148 aaKnown RBP12.08□□□□□ -0.48
CCDC12-211ENST00000604367 SUB1P53999 127 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC12-211ENST00000604367 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.48
CCDC12-211ENST00000604367 PNRC1Q12796 327 aaPredicted RBP12.08□□□□□ -0.48
CCDC12-211ENST00000604367 PLGLAQ15195 96 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 TPTE2P1Q5T6R2 138 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 MIR17HGQ75NE6 70 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 OR11H6Q8NGC7 330 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 DPM3Q9P2X0 92 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 A0A087WWC5 75 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 IGLC7A0M8Q6 106 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 A6NJY4 79 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 RAB5AP20339 215 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 PRTN3P24158 256 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 EFNA4P52798 201 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 ADIRFQ15847 76 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
CCDC12-211ENST00000604367 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 ABCA1O95477 2261 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 M0R1W7 72 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 FCN1O00602 326 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 NPPCP23582 126 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 LCN2P80188 198 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 TMEM241Q24JQ0 296 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 TMEM249Q2WGJ8 235 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 SAV1Q9H4B6 383 aaPredicted RBP12.07□□□□□ -0.48
CCDC12-211ENST00000604367 MRPL36Q9P0J6 103 aaKnown RBP12.07□□□□□ -0.48
CCDC12-211ENST00000604367 NAT8Q9UHE5 227 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 GPX4P36969 197 aaPredicted RBP12.07□□□□□ -0.48
CCDC12-211ENST00000604367 COMPP49747 757 aaPredicted RBP12.07□□□□□ -0.48
CCDC12-211ENST00000604367 LGALS4P56470 323 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 SSX2Q16385 188 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 VMO1Q7Z5L0 202 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
CCDC12-211ENST00000604367 MISP3Q96FF7 219 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 EPG5Q9HCE0 2579 aa12.07□□□□□ -0.48
CCDC12-211ENST00000604367 FLNCQ14315 2725 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 IGHV3-21A0A0B4J1V1 117 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 B4DEV8 164 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
CCDC12-211ENST00000604367 VENTXO95231 258 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 GCHFRP30047 84 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 MMDQ15546 238 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 CYP2G1PQ6ZSU1 146 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 BPESC1Q9GZL8 116 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 ZNF90Q03938 601 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 HABP2Q14520 560 aaPredicted RBP12.06□□□□□ -0.48
CCDC12-211ENST00000604367 ELOBQ15370 118 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 RNF212Q495C1 297 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 RUSC1-AS1Q66K80 236 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 NANPQ8TBE9 248 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
CCDC12-211ENST00000604367 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
CCDC12-211ENST00000604367 NDUFB4O95168 129 aa12.05□□□□□ -0.48
CCDC12-211ENST00000604367 FOLR2P14207 255 aa12.05□□□□□ -0.48
CCDC12-211ENST00000604367 MFAP2P55001 183 aa12.05□□□□□ -0.48
CCDC12-211ENST00000604367 Q8WTZ3 238 aa12.05□□□□□ -0.48
CCDC12-211ENST00000604367 SSX3Q99909 188 aa12.05□□□□□ -0.48
CCDC12-211ENST00000604367 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms