RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 ROBO3Q96MS0 1386 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 KIAA1551Q9HCM1 1747 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 G3V3Q6 166 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 TTRP02766 147 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 P0C880 135 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 GZMBP10144 247 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 CPMP14384 443 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 HIST1H3AP68431 136 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 H3F3AP84243 136 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 PSG4Q00888 419 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 C2orf91Q6ZV80 131 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 GLT6D1Q7Z4J2 308 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 AP3S1Q92572 193 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 NMNAT3Q96T66 252 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 CMTM6Q9NX76 183 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 PKIGQ9Y2B9 76 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 ARL2BPQ9Y2Y0 163 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 TIMM22Q9Y584 194 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 CASZ1Q86V15 1759 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 NUP205Q92621 2012 aa2.12□□□□□ -2.07
AC004542.1-201ENST00000602955 PLIN4Q96Q06 1357 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 DDX60LQ5H9U9 1706 aaKnown RBP2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 MYH3P11055 1940 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 A0A1B0GUL6 1792 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 MAST2Q6P0Q8 1798 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 DLEC1Q9Y238 1755 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 KNCNA6PVL3 124 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 E5RI56 91 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 H3BPC8 53 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 PLA2G10O15496 165 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 KCNE1P15382 129 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 CD24P25063 80 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 XCL1P47992 114 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 TAS2R20P59543 309 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 RAB14P61106 215 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 SARNPP82979 210 aaKnown RBP2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 GNA12Q03113 381 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 ALX1Q15699 326 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 GUK1Q16774 197 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 GLT8D1Q68CQ7 371 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 TMPPEQ6ZT21 453 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 TCF24Q7RTU0 167 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 OR6V1Q8N148 313 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 OR4X1Q8NH49 305 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 NEK7Q8TDX7 302 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 KLK6Q92876 244 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 BORCS7Q96B45 105 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 CEP19Q96LK0 163 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 TRIM4Q9C037 500 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 AICDAQ9GZX7 198 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 PRELID3BQ9Y3B1 194 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 NUP98P52948 1817 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 DOCK2Q92608 1830 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 TNRC6CQ9HCJ0 1690 aaKnown RBP2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 CCDC171Q6TFL3 1326 aa2.11□□□□□ -2.07
AC004542.1-201ENST00000602955 COL1A1P02452 1464 aaPredicted RBP2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 TMEM235A6NFC5 223 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 NOS1APO75052 506 aaPredicted RBP2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 NPYP01303 97 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 HLA-DRB1P01911 266 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 SNRPD2P62316 118 aaKnown RBP2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 CDK10Q15131 360 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 MOGQ16653 247 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 IAH1Q2TAA2 248 aaPredicted RBP2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 LPCAT3Q6P1A2 487 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 SMARCD3Q6STE5 483 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 TBC1D19Q8N5T2 526 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 SMCR5Q8TEV8 140 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 ZNF471Q9BX82 626 aaPredicted RBP2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 ULBP3Q9BZM4 244 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 DOK5Q9P104 306 aa2.1□□□□□ -2.07
AC004542.1-201ENST00000602955 CACNA1SQ13698 1873 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 AKAP11Q9UKA4 1901 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 SRCAPQ6ZRS2 3230 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 VPS37CA5D8V6 355 aaPredicted RBP2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 OR4C46A6NHA9 309 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 H3BQV1 296 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 FAAHO00519 579 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 CTSGP08311 255 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 SRP19P09132 144 aaKnown RBP2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 CST2P09228 141 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 RPL5P46777 297 aaKnown RBP2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 RAB13P51153 203 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 FXYD7P58549 80 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 ARPC4P59998 168 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 KRTAP10-8P60410 259 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 GRK1Q15835 563 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 FKBP1CQ5VVH2 108 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 SSX8Q7RTT4 187 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 OR5C1Q8NGR4 320 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 OR10X1Q8NGY0 326 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 TEX47Q8TBZ9 253 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 ZNF675Q8TD23 568 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 PRRT1Q99946 306 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 MIEN1Q9BRT3 115 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 PRTFDC1Q9NRG1 225 aa2.09□□□□□ -2.07
AC004542.1-201ENST00000602955 IDI2-AS1Q9NZ38 188 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms