RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 M0R1B8 84 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 CDC42EP2O14613 210 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 DEDDO75618 318 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 P01737 135 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 C3orf79P0CE67 100 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 FABP2P12104 132 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 HIST1H1DP16402 221 aaKnown RBP4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 GPR183P32249 361 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 CXCL12P48061 93 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 EIF3IQ13347 325 aaKnown RBP4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 CD226Q15762 336 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 Q6AWC8 147 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 SHISA6Q6ZSJ9 500 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 SYT8Q8NBV8 401 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 OR8S1Q8NH09 359 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 C18orf32Q8TCD1 76 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 C2orf15Q8WU43 125 aaKnown RBP4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 KCNS1Q96KK3 526 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 PMCHL2Q9BQD1 86 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 HES4Q9HCC6 221 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 TRGV10A0A0A0MS01 117 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 FNDC10F2Z333 226 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 H3BUT2 72 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 ISLRO14498 428 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 VDAC1P21796 283 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 CFPP27918 469 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 PPP1CBP62140 327 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF146Q15072 292 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 PRR30Q53SZ7 412 aaPredicted RBP4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 PIP4P1Q86T03 277 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 BAGE3Q86Y29 109 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 BAGE2Q86Y30 109 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 FBXL14Q8N1E6 418 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 MORN4Q8NDC4 146 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 OR51A4Q8NGJ6 313 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 POLR1DQ9Y2S0 133 aa4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 SOX21Q9Y651 276 aaPredicted RBP4.06□□□□□ -1.76
SPTBN1-206ENST00000602898 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TNFP01375 233 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 PI3P19957 117 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 FBXW4P57775 412 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 ATP5G2Q06055 141 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 STPG1Q5TH74 334 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 C9orf57Q5W0N0 161 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 KLHDC9Q8NEP7 349 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 ATP6V0E2Q8NHE4 81 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 CT55Q8WUE5 264 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 SRSF12Q8WXF0 261 aaKnown RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM222Q9H0R3 208 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF257Q9Y2Q1 563 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 IER3IP1Q9Y5U9 82 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 DOCK6Q96HP0 2047 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TRAV9-1A0A075B6T8 112 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 A0A1B0GV50 99 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 C9JAW5 83 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 H3BP45 60 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 SOCS1O15524 211 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TNFSF12O43508 249 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 OR9G9P0C7N8 305 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 FAM106CPP0CH98 169 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 BCL2P10415 239 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GATA2P23769 480 aaPredicted RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 RPS28P62857 69 aaKnown RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM187Q14656 261 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 CDK5R1Q15078 307 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 Q499Y3 187 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 FAM106AQ4KMX7 169 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GLYATL3Q5SZD4 288 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 SLC22A18ASQ8N1D0 253 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM86AQ8N2M4 240 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNRF2Q8NHG8 242 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 RTN4IP1Q8WWV3 396 aaPredicted RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 BORCS7Q96B45 105 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 SMIM14Q96QK8 99 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 AMELYQ99218 206 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 SH3BGRL3Q9H299 93 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 HIGD1AQ9Y241 93 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 KIF26AQ9ULI4 1882 aaPredicted RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 C2orf16Q68DN1 1984 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 KMT2BQ9UMN6 2715 aaPredicted RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GRIFINA4D1Z8 144 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 J3QLW9 94 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 IGLV3-25P01717 112 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 LIFP15018 202 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 CRYBB3P26998 211 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 RBM11P57052 281 aaKnown RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 RPS11P62280 158 aaKnown RBP eCLIP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF85Q03923 595 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GAGE2EQ4V326 116 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GAGE2AQ6NT46 116 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 FBXL22Q6P050 247 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 SPATA12Q7Z6I5 190 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 OR5D14Q8NGL3 314 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 OR1L3Q8NH93 324 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms