RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	SLC25A46	Q96AG3	418 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190	PRND	Q9UKY0	176 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190		A0A0A6YYH2	397 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190		A6NJ64	397 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	PGLYRP1	O75594	196 aa	Predicted RBP	13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	YIF1A	O95070	293 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	MT-CO2	P00403	227 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	FXYD4	P59646	89 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	DHRS11	Q6UWP2	260 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	STH	Q8IWL8	128 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	FKBP11	Q9NYL4	201 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	ANAPC10	Q9UM13	185 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	NACA	E9PAV3	2078 aa		13.14	□□□□□ -0.31
IRF3-231	ENST00000602190	DEFB131B	A0A096LNP1	70 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	EBAG9	O00559	213 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	ST8SIA3	O43173	380 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	KRAS	P01116	189 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	G6PC	P35575	357 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	SFXN4	Q6P4A7	337 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	TMEM17	Q86X19	198 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	ZNF575	Q86XF7	245 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	DCANP1	Q8TF63	244 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	MOB3A	Q96BX8	217 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	SCRT1	Q9BWW7	348 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	HINT2	Q9BX68	163 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	AUNIP	Q9H7T9	357 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	TXNL4B	Q9NX01	149 aa	Known RBP	13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	DAPK2	Q9UIK4	370 aa		13.13	□□□□□ -0.31
IRF3-231	ENST00000602190	SNAPC5	O75971	98 aa		13.12	□□□□□ -0.31
IRF3-231	ENST00000602190	RLN1	P04808	185 aa		13.12	□□□□□ -0.31
IRF3-231	ENST00000602190	LPAR6	P43657	344 aa		13.12	□□□□□ -0.31
IRF3-231	ENST00000602190	ZNF600	Q6ZNG1	722 aa		13.12	□□□□□ -0.31
IRF3-231	ENST00000602190	NRG4	Q8WWG1	115 aa		13.12	□□□□□ -0.31
IRF3-231	ENST00000602190	TSC22D3	Q99576	134 aa		13.12	□□□□□ -0.31
IRF3-231	ENST00000602190	TRAV18	A0A075B6X5	111 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190		A0A1B0GU03	582 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	DNASE2	O00115	360 aa	Predicted RBP	13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	GNG7	O60262	68 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	PRCD	Q00LT1	54 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	OR5H6	Q8NGV6	325 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	SEC22A	Q96IW7	307 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	NDUFAF3	Q9BU61	184 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	TBC1D24	Q9ULP9	559 aa		13.11	□□□□□ -0.31
IRF3-231	ENST00000602190	INS-IGF2	F8WCM5	200 aa		13.1	□□□□□ -0.31
IRF3-231	ENST00000602190	EIF4E	P06730	217 aa	Known RBP	13.1	□□□□□ -0.31
IRF3-231	ENST00000602190	CBX5	P45973	191 aa		13.1	□□□□□ -0.31
IRF3-231	ENST00000602190	UBE2U	Q5VVX9	321 aa		13.1	□□□□□ -0.31
IRF3-231	ENST00000602190	MISP3	Q96FF7	219 aa		13.1	□□□□□ -0.31
IRF3-231	ENST00000602190	RRP15	Q9Y3B9	282 aa	Known RBP	13.1	□□□□□ -0.31
IRF3-231	ENST00000602190	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
IRF3-231	ENST00000602190		M0R2N4	97 aa		13.09	□□□□□ -0.31
IRF3-231	ENST00000602190	IGHV3-48	P01763	117 aa		13.09	□□□□□ -0.31
IRF3-231	ENST00000602190	CRYBB3	P26998	211 aa		13.09	□□□□□ -0.31
IRF3-231	ENST00000602190		Q6ZRM9	215 aa		13.09	□□□□□ -0.31
IRF3-231	ENST00000602190	FXYD6	Q9H0Q3	95 aa		13.09	□□□□□ -0.31
IRF3-231	ENST00000602190	TMEM231	Q9H6L2	316 aa		13.09	□□□□□ -0.31
IRF3-231	ENST00000602190	CDK2AP2	O75956	126 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190	TMEM50A	O95807	157 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190	IGKV1-39	P01597	117 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190	IGKV1D-39	P04432	117 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190	FAM210B	Q96KR6	192 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190		U3KQE9	123 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190	LRP1B	Q9NZR2	4599 aa		13.08	□□□□□ -0.32
IRF3-231	ENST00000602190	IGHV3-66	A0A0C4DH42	116 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	KNCN	A6PVL3	124 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	NAT1	P18440	290 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	NPBWR1	P48145	328 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	HERV-K104	P61576	105 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	KCTD21	Q4G0X4	260 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	NEU1	Q99519	415 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	CLEC5A	Q9NY25	188 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190	EHF	Q9NZC4	300 aa		13.07	□□□□□ -0.32
IRF3-231	ENST00000602190		A0A1W2PS18	150 aa		13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	GPR31	O00270	319 aa		13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF688	P0C7X2	276 aa		13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	HSPE1	P61604	102 aa	Known RBP	13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF767P	Q75MW2	155 aa		13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	RABAC1	Q9UI14	185 aa		13.06	□□□□□ -0.32
IRF3-231	ENST00000602190	FCER2	P06734	321 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	P2RY1	P47900	373 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	RFX2	P48378	723 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	CMTM1	Q8IZ96	169 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	CENPS	Q8N2Z9	138 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	PLA2G2E	Q9NZK7	142 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	MRPL36	Q9P0J6	103 aa	Known RBP	13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	BLOC1S6	Q9UL45	172 aa		13.05	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.04	□□□□□ -0.32
IRF3-231	ENST00000602190		P0C879	139 aa		13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF705D	P0CH99	300 aa	Predicted RBP	13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	ZNF705B	P0CI00	300 aa	Predicted RBP	13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	NPPC	P23582	126 aa		13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	SDC2	P34741	201 aa		13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	RNF212	Q495C1	297 aa		13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	ACTL10	Q5JWF8	245 aa		13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	STXBP6	Q8NFX7	210 aa		13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	PINX1	Q96BK5	328 aa	Known RBP	13.04	□□□□□ -0.32
IRF3-231	ENST00000602190	RAB40C	Q96S21	281 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms