RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SMCO3A2RU48 225 aa17.79■□□□□ 0.44
IRF3-228ENST00000601291 LINC01548A6NM66 108 aa17.79■□□□□ 0.44
IRF3-228ENST00000601291 IFITM2Q01629 132 aa17.79■□□□□ 0.44
IRF3-228ENST00000601291 CD69Q07108 199 aa17.79■□□□□ 0.44
IRF3-228ENST00000601291 C19orf35Q6ZS72 473 aa17.79■□□□□ 0.44
IRF3-228ENST00000601291 FAM110DQ8TAY7 271 aaPredicted RBP17.79■□□□□ 0.44
IRF3-228ENST00000601291 SCGB1C1Q8TD33 95 aa17.79■□□□□ 0.44
IRF3-228ENST00000601291 NAV3Q8IVL0 2385 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 FNDC10F2Z333 226 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 IFNA7P01567 189 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 IGF1P05019 195 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 GPX4P36969 197 aaPredicted RBP17.78■□□□□ 0.44
IRF3-228ENST00000601291 MFAP2P55001 183 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 EXOSC2Q13868 293 aaKnown RBP17.78■□□□□ 0.44
IRF3-228ENST00000601291 ETFRF1Q6IPR1 90 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 ZNF418Q8TF45 676 aaPredicted RBP17.78■□□□□ 0.44
IRF3-228ENST00000601291 CACNG8Q8WXS5 425 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 PHYHIPLQ96FC7 376 aa17.78■□□□□ 0.44
IRF3-228ENST00000601291 PARD6GQ9BYG4 376 aaPredicted RBP17.78■□□□□ 0.44
IRF3-228ENST00000601291 ACANP16112 2415 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 PLXNB1O43157 2135 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 TRAV41A0A0B4J266 112 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 RPS10-NUDT3A0A1W2PQS6 291 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 DNAJC9-AS1A6NH13 148 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 EIF5AL1Q6IS14 154 aaKnown RBP17.77■□□□□ 0.44
IRF3-228ENST00000601291 Q71RC1 249 aaPredicted RBP17.77■□□□□ 0.44
IRF3-228ENST00000601291 SLC16A13Q7RTY0 426 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 HSD17B11Q8NBQ5 300 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 DUX5Q96PT3 197 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 PRSS22Q9GZN4 317 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 ARV1Q9H2C2 271 aa17.77■□□□□ 0.44
IRF3-228ENST00000601291 GSX1Q9H4S2 264 aaPredicted RBP17.77■□□□□ 0.44
IRF3-228ENST00000601291 TRIM77I1YAP6 450 aa17.76■□□□□ 0.43
IRF3-228ENST00000601291 AP4M1O00189 453 aa17.76■□□□□ 0.43
IRF3-228ENST00000601291 AKR1C1Q04828 323 aa17.76■□□□□ 0.43
IRF3-228ENST00000601291 OR5T1Q8NG75 326 aa17.76■□□□□ 0.43
IRF3-228ENST00000601291 SLC35E1Q96K37 410 aa17.76■□□□□ 0.43
IRF3-228ENST00000601291 GINS3Q9BRX5 216 aa17.76■□□□□ 0.43
IRF3-228ENST00000601291 WDR61Q9GZS3 305 aaKnown RBP17.76■□□□□ 0.43
IRF3-228ENST00000601291 INAFM1C9JVW0 142 aa17.75■□□□□ 0.43
IRF3-228ENST00000601291 CFDP00746 253 aaPredicted RBP17.75■□□□□ 0.43
IRF3-228ENST00000601291 ARSJQ5FYB0 599 aaPredicted RBP17.75■□□□□ 0.43
IRF3-228ENST00000601291 ZNF767PQ75MW2 155 aa17.75■□□□□ 0.43
IRF3-228ENST00000601291 ZNF680Q8NEM1 530 aa17.75■□□□□ 0.43
IRF3-228ENST00000601291 GNPNAT1Q96EK6 184 aaPredicted RBP17.75■□□□□ 0.43
IRF3-228ENST00000601291 NPVFQ9HCQ7 196 aa17.75■□□□□ 0.43
IRF3-228ENST00000601291 THYN1Q9P016 225 aa17.75■□□□□ 0.43
IRF3-228ENST00000601291 TLN2Q9Y4G6 2542 aa17.75■□□□□ 0.43
IRF3-228ENST00000601291 G3V318 75 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 CLDN34H7C241 214 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 HIST1H1BP16401 226 aaKnown RBP17.74■□□□□ 0.43
IRF3-228ENST00000601291 ALKAL2Q6UX46 152 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 ZNF580Q9UK33 172 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 DMRT1Q9Y5R6 373 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 IGLV11-55A0A075B6I3 123 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 FGF7P21781 194 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 Q6ZS46 218 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 TAF15Q92804 592 aaKnown RBP eCLIP17.74■□□□□ 0.432e-8■■□□□ 13.9
IRF3-228ENST00000601291 FNDC4Q9H6D8 234 aaPredicted RBP17.74■□□□□ 0.43
IRF3-228ENST00000601291 UBQLN2Q9UHD9 624 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 WDR83OSQ9Y284 106 aa17.74■□□□□ 0.43
IRF3-228ENST00000601291 RGS13O14921 159 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 MPDU1O75352 247 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 MT-CO2P00403 227 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 PRH1P02810 166 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 ATP6V0CP27449 155 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 GAMTQ14353 236 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 C19orf54Q5BKX5 351 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 BTNL8Q6UX41 500 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 TREML4Q6UXN2 200 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 LINC00527Q9UJ94 153 aa17.73■□□□□ 0.43
IRF3-228ENST00000601291 SEC11BP0C7V7 166 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 RUNX1Q01196 453 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 TEPPQ6URK8 271 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 SCARB1Q8WTV0 552 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 TMED6Q8WW62 240 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 FANCD2OSQ96PS1 177 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 JMJD8Q96S16 334 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 ZNF355PQ9NSJ1 428 aa17.72■□□□□ 0.43
IRF3-228ENST00000601291 SPP1P10451 314 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 MDKP21741 143 aaPredicted RBP17.71■□□□□ 0.43
IRF3-228ENST00000601291 MLANAQ16655 118 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 TMEM144Q7Z5S9 345 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 ACY3Q96HD9 319 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 SLC25A32Q9H2D1 315 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 ZNF702PQ9H963 129 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 ESM1Q9NQ30 184 aa17.71■□□□□ 0.43
IRF3-228ENST00000601291 CYSRT1A8MQ03 144 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 C17orf112F2Z3M2 114 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 I3L2K1 104 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 HILS1P60008 231 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 RAB31Q13636 194 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 ZNF709Q8N972 641 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 OR2T6Q8NHC8 308 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 NOL4LQ96MY1 436 aaPredicted RBP17.7■□□□□ 0.42
IRF3-228ENST00000601291 NPCDR1Q9BY65 106 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 SH3BGRL3Q9H299 93 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 HIVEP2P31629 2446 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 FAM157CP0CG43 387 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 KLK9Q2XQG4 91 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms