RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FXYD3Q14802 87 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 TMEM30BQ3MIR4 351 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 COMMD5Q9GZQ3 224 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 GAL3ST2Q9H3Q3 398 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 ZGRF1Q86YA3 2104 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 GVINP1Q7Z2Y8 2422 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 CRISP2P16562 243 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 DIAPH2-AS1Q14236 149 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 WFDC8Q8IUA0 241 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 NUP37Q8NFH4 326 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 OSR1Q8TAX0 266 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 FAM57AQ8TBR7 257 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 NDUFA4L2Q9NRX3 87 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 NAGKQ9UJ70 344 aa16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 POLR3KQ9Y2Y1 108 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-225ENST00000600733 TRAV5A0A0B4J249 113 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 SNURFLB1AK76 121 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 F2Z2F3 143 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 SERF1AO75920 110 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 APOA2P02652 100 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 SSBP2P81877 361 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 ADIPOQQ15848 244 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 USF2Q15853 346 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 TMEM108Q6UXF1 575 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 ZNF714Q96N38 554 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 SLC25A33Q9BSK2 321 aa16.41■□□□□ 0.22
SHKBP1-225ENST00000600733 RIF1Q5UIP0 2472 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 CRYABP02511 175 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 TNFRSF1AP19438 455 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 RPL8P62917 257 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 TMEM200BQ69YZ2 307 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 ST6GALNAC3Q8NDV1 305 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 C17orf100A8MU93 164 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 IGHV3-48P01763 117 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 TAS2R45P59539 299 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 SLC35B1P78383 322 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 C10orf55Q5SWW7 151 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 PLXNB1O43157 2135 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 ZNF318Q5VUA4 2279 aa16.4■□□□□ 0.22
SHKBP1-225ENST00000600733 C8orf88P0DMB2 117 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 Q6ZWC4 215 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 DMRTC2Q8IXT2 367 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 BEND2Q8NDZ0 799 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 OR5AN1Q8NGI8 311 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 C2orf88Q9BSF0 95 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 DPRXA6NFQ7 191 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 ATP5IP56385 69 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 TIGITQ495A1 244 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 PNKDQ8N490 385 aa16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 H1FXQ92522 213 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 FLYWCH2Q96CP2 140 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-225ENST00000600733 PIEZO2Q9H5I5 2752 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 A0A0G2JNJ9 132 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 PSMB11A5LHX3 300 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 DLL1O00548 723 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 TCL1AP56279 114 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 TAS2R60P59551 318 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 ERHP84090 104 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 MEF2CQ06413 473 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 ASPHD1Q5U4P2 390 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 FAM167A-AS1Q96KT0 104 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 C19orf24Q9BVV8 132 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 SLC25A2Q9BXI2 301 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 Q9UFV3 132 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 IGLV2-8P01709 118 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 WT1-ASQ06250 92 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 BSPH1Q075Z2 132 aa16.38■□□□□ 0.21
SHKBP1-225ENST00000600733 CGB1A6NKQ9 187 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 ZNF705FA8MVS1 300 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 EREGO14944 169 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 ZNF705DP0CH99 300 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 ZNF705BP0CI00 300 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 MGST1P10620 155 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 TPPP2P59282 170 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 TMEM177Q53S58 311 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 LYPD2Q6UXB3 125 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 BAGE3Q86Y29 109 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 BAGE2Q86Y30 109 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 NHLRC2Q8NBF2 726 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 OR10X1Q8NGY0 326 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 CCL17Q92583 94 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 TBX15Q96SF7 602 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 FNDC4Q9H6D8 234 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 SAP30LQ9HAJ7 183 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 TMEM106BQ9NUM4 274 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 ACACAQ13085 2346 aa16.37■□□□□ 0.21
SHKBP1-225ENST00000600733 A0A1W2PRE2 83 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 C16orf97H3BN30 126 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 UBE2L3P68036 154 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 CX3CL1P78423 397 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 C1orf194Q5T5A4 169 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 CACNG8Q8WXS5 425 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 IGF2BP2-AS1Q96M15 143 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 LINC00479Q96M42 142 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 CBLN4Q9NTU7 201 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 SH3BGRL2Q9UJC5 107 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 KLK10O43240 276 aa16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 USF1P22415 310 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 LBHQ53QV2 105 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-225ENST00000600733 OR5AU1Q8NGC0 362 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms