RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 C2orf83Q53S99 150 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 FAM223AQ8IWN6 122 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 KLHL30-AS1Q8NEE0 82 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 OR1L6Q8NGR2 347 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 MISP3Q96FF7 219 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 OR4C12Q96R67 309 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 C11orf1Q9H5F2 150 aa15.5■□□□□ 0.07
SHKBP1-222ENST00000600320 H3BP45 60 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 K7EIM0 57 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 IFNA10P01566 189 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 IGHV3-23P01764 117 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 S100A10P60903 97 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 ATP5G2Q06055 141 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 C8orf86Q6ZUL3 223 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 USMG5Q96IX5 58 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 CIB3Q96Q77 187 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 U3KQ87 197 aa15.49■□□□□ 0.07
SHKBP1-222ENST00000600320 A0A0G2JLM5 398 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 NUDT19A8MXV4 375 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 I3L2K1 104 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 SUB1P53999 127 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 EXOSC2Q13868 293 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 DEFB136Q30KP8 78 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 LRRC37A5PQ49AS3 106 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 C4orf3Q8WVX3 66 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 PINX1Q96BK5 328 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 SMIM8Q96KF7 97 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 PSENENQ9NZ42 101 aa15.48■□□□□ 0.07
SHKBP1-222ENST00000600320 I3L521 148 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 CYB5BO43169 146 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 MT-CO2P00403 227 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 IGHV3-48P01763 117 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 LGALS1P09382 135 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 CYCSP99999 105 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 MLANAQ16655 118 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 SPANXN5Q5MJ07 72 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 ZNF343Q6P1L6 599 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 SCARB1Q8WTV0 552 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 PPP1R1CQ8WVI7 109 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 DUX3Q96PT4 197 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 RAB40CQ96S21 281 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 ZNF436Q9C0F3 470 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 FNDC4Q9H6D8 234 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 THYN1Q9P016 225 aa15.47■□□□□ 0.07
SHKBP1-222ENST00000600320 H0YIZ8 118 aa15.46■□□□□ 0.07
SHKBP1-222ENST00000600320 TRBV12-3P01733 135 aa15.46■□□□□ 0.07
SHKBP1-222ENST00000600320 CHAC2Q8WUX2 184 aa15.46■□□□□ 0.07
SHKBP1-222ENST00000600320 CCDC140Q96MF4 163 aa15.46■□□□□ 0.07
SHKBP1-222ENST00000600320 PAIP2BQ9ULR5 123 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-222ENST00000600320 ANKRD34BA5PLL1 514 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 TAS2R30P59541 319 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 RUNX1Q01196 453 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 ETV3LQ6ZN32 361 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 ZNF502Q8TBZ5 544 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 VN1R17PQ8TDU5 208 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 EEF1AKMT3Q96AZ1 226 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 OR5AC2Q9NZP5 309 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 MRPL36Q9P0J6 103 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 TENM1Q9UKZ4 2725 aa15.45■□□□□ 0.06
SHKBP1-222ENST00000600320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 F8W735 103 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 L7N2F9 121 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 CORTO00230 105 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 DEDDO75618 318 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 CCNKO75909 580 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 LY86O95711 162 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 TSPAN15O95858 294 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 VAMP2P63027 116 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 TMEM14EPQ6UXP3 125 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 RNASEH2CQ8TDP1 164 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 RAX2Q96IS3 184 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 CXorf58Q96LI9 332 aa15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 STRAPQ9Y3F4 350 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-222ENST00000600320 hCG_2014768A0A024R1R8 64 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 IGHV4OR15-8A0A075B7B6 117 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 A0A087WW49 117 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 TRAV14DV4A0A0A6YYC5 116 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 A0A1B0GVG6 124 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 FAM24AA6NFZ4 105 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 PMS2P5A8MQ11 134 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 TSC22D2O75157 780 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 MPC2O95563 127 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 IFNA4P05014 189 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 GIPP09681 153 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 OR8U8P0C7N1 319 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 OPRK1P41145 380 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 ATP5IP56385 69 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 CLEC19AQ6UXS0 136 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 NOXA1Q86UR1 476 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 RNF126Q9BV68 326 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 C21orf62Q9NYP8 219 aa15.43■□□□□ 0.06
SHKBP1-222ENST00000600320 PRSS46E5RG02 174 aa15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 RAB11AP62491 216 aa15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 RPP30P78346 268 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 CD69Q07108 199 aa15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 Q5BKY6 102 aa15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 HAPLN4Q86UW8 402 aa15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 OR11H1Q8NG94 326 aa15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 PEF1Q9UBV8 284 aaKnown RBP15.42■□□□□ 0.06
SHKBP1-222ENST00000600320 TRBV7-1A0A0A6YYK4 115 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms