RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 KLK9Q2XQG4 91 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 VN1R17PQ8TDU5 208 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 RANGRFQ9HD47 186 aaPredicted RBP12.97□□□□□ -0.33
USHBP1-210ENST00000600286 GAR1Q9NY12 217 aaKnown RBP12.97□□□□□ -0.33
USHBP1-210ENST00000600286 MGAT4CQ9UBM8 478 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 KLK9Q9UKQ9 250 aa12.97□□□□□ -0.33
USHBP1-210ENST00000600286 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
USHBP1-210ENST00000600286 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 NDUFB8O95169 186 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 IFNA4P05014 189 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 RNASE2P10153 161 aaKnown RBP12.96□□□□□ -0.33
USHBP1-210ENST00000600286 IAPPP10997 89 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 MYCNOSP40205 109 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 RUNX1Q01196 453 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.33
USHBP1-210ENST00000600286 C2orf83Q53S99 150 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 C8orf86Q6ZUL3 223 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.33
USHBP1-210ENST00000600286 RAB40CQ96S21 281 aa12.96□□□□□ -0.33
USHBP1-210ENST00000600286 PEF1Q9UBV8 284 aaKnown RBP12.96□□□□□ -0.33
USHBP1-210ENST00000600286 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 HSPB1P04792 205 aaKnown RBP12.95□□□□□ -0.34
USHBP1-210ENST00000600286 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 POLR2GP62487 172 aaKnown RBP eCLIP12.95□□□□□ -0.34
USHBP1-210ENST00000600286 HIST2H2BDQ6DRA6 164 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 ZNF343Q6P1L6 599 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 RNASEH2CQ8TDP1 164 aaKnown RBP12.95□□□□□ -0.34
USHBP1-210ENST00000600286 NMES1Q9C002 83 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 GNB4Q9HAV0 340 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
USHBP1-210ENST00000600286 STRAPQ9Y3F4 350 aaKnown RBP12.95□□□□□ -0.34
USHBP1-210ENST00000600286 LSM5Q9Y4Y9 91 aaKnown RBP12.95□□□□□ -0.34
USHBP1-210ENST00000600286 ANKRD34BA5PLL1 514 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 I3L521 148 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 CCL24O00175 119 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 SSSCA1O60232 199 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 SIX6O95475 246 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 MBPP02686 304 aaPredicted RBP12.94□□□□□ -0.34
USHBP1-210ENST00000600286 OPRK1P41145 380 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 MFAP4P55083 255 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 TAS2R30P59541 319 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 S100A10P60903 97 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 ZNF616Q08AN1 781 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 OR11H1Q8NG94 326 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 SMIM8Q96KF7 97 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 C21orf62Q9NYP8 219 aa12.94□□□□□ -0.34
USHBP1-210ENST00000600286 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
USHBP1-210ENST00000600286 ADARB2-AS1A8MUL3 147 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 LINC01619G3V211 115 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 MT-CO2P00403 227 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 ZP3P21754 424 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 NPBWR1P48145 328 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 DEFA5Q01523 94 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 BSXQ3C1V8 233 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 SPANXN5Q5MJ07 72 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 C18orf65Q6ZTR6 163 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 ATP6V0BQ99437 205 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 TXN2Q99757 166 aa12.93□□□□□ -0.34
USHBP1-210ENST00000600286 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.92□□□□□ -0.34
USHBP1-210ENST00000600286 PET100P0DJ07 73 aa12.92□□□□□ -0.34
USHBP1-210ENST00000600286 MFAP2P55001 183 aa12.92□□□□□ -0.34
USHBP1-210ENST00000600286 Q56UQ5 140 aa12.92□□□□□ -0.34
USHBP1-210ENST00000600286 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
USHBP1-210ENST00000600286 SCARB1Q8WTV0 552 aa12.92□□□□□ -0.34
USHBP1-210ENST00000600286 RCL1Q9Y2P8 373 aaKnown RBP12.92□□□□□ -0.34
USHBP1-210ENST00000600286 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
USHBP1-210ENST00000600286 MEGF8Q7Z7M0 2845 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 IGHV3-21A0A0B4J1V1 117 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 K7EPK0 472 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 SCAF4O95104 1147 aaKnown RBP12.91□□□□□ -0.34
USHBP1-210ENST00000600286 CLEC3BP05452 202 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 SLC25A4P12235 298 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 ARL3P36405 182 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 BCAP31P51572 246 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 RRAS2P62070 204 aaPredicted RBP12.91□□□□□ -0.34
USHBP1-210ENST00000600286 RPEL1Q2QD12 228 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 CLEC19AQ6UXS0 136 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 ETV3LQ6ZN32 361 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 UBAC2Q8NBM4 344 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 RAX2Q96IS3 184 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 DMRT1Q9Y5R6 373 aa12.91□□□□□ -0.34
USHBP1-210ENST00000600286 MFSD2BA6NFX1 497 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 I3L2K1 104 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 K7EIM0 57 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 GNG7O60262 68 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 TSC22D2O75157 780 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 GGCTO75223 188 aaKnown RBP12.9□□□□□ -0.34
USHBP1-210ENST00000600286 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 GPX4P36969 197 aaPredicted RBP12.9□□□□□ -0.34
USHBP1-210ENST00000600286 RAB32Q13637 225 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 DEFB136Q30KP8 78 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 SPSB3Q6PJ21 355 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 ZNF502Q8TBZ5 544 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 DCUN1D4Q92564 292 aa12.9□□□□□ -0.34
USHBP1-210ENST00000600286 BSCL2Q96G97 398 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms