RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 MARCH1Q8TCQ1 289 aa8.18□□□□□ -1.1
SIN3B-210ENST00000599880 SPAG8Q99932 426 aaPredicted RBP8.18□□□□□ -1.1
SIN3B-210ENST00000599880 WFDC10AQ9H1F0 79 aa8.18□□□□□ -1.1
SIN3B-210ENST00000599880 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
SIN3B-210ENST00000599880 STARD9Q9P2P6 4700 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 IGHV3-21A0A0B4J1V1 117 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 A0A0B4J293 547 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 H3BMQ9 156 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 NUPL2O15504 423 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 ST8SIA3O43173 380 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 GSTZ1O43708 216 aaPredicted RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 SCAF4O95104 1147 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 CDS2O95674 445 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 MT-CO2P00403 227 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 LYL1P12980 280 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 AARDQ4LEZ3 155 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 LAMTOR1Q6IAA8 161 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 SLC35G3Q8N808 338 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 OR4C16Q8NGL9 310 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 RRNAD1Q96FB5 475 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 MISP3Q96FF7 219 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 OR10C1Q96KK4 312 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 PRRT1Q99946 306 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 FAM110AQ9BQ89 295 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 PDCD10Q9BUL8 212 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 SLIRPQ9GZT3 109 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 TMEM222Q9H0R3 208 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 HIPK2Q9H2X6 1198 aa8.17□□□□□ -1.1
SIN3B-210ENST00000599880 RSL24D1Q9UHA3 163 aaKnown RBP8.17□□□□□ -1.1
SIN3B-210ENST00000599880 ANKRD20A5PA0PJZ0 165 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 SNCAP37840 140 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 IZUMO4Q1ZYL8 232 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 SP6Q3SY56 376 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 FAAP20Q6NZ36 180 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 GLYATL2Q8WU03 294 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 RBPMSQ93062 196 aaKnown RBP8.16□□□□□ -1.1
SIN3B-210ENST00000599880 ZNF414Q96IQ9 312 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 RTBDNQ9BSG5 229 aaPredicted RBP8.16□□□□□ -1.1
SIN3B-210ENST00000599880 C6orf62Q9GZU0 229 aaPredicted RBP8.16□□□□□ -1.1
SIN3B-210ENST00000599880 NXF2Q9GZY0 626 aaKnown RBP8.16□□□□□ -1.1
SIN3B-210ENST00000599880 NAA60Q9H7X0 242 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 GPR132Q9UNW8 380 aa8.16□□□□□ -1.1
SIN3B-210ENST00000599880 A0A0G2JRQ6 117 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 TEX13DA0A0J9YY54 714 aaPredicted RBP8.15□□□□□ -1.1
SIN3B-210ENST00000599880 CRYM-AS1A6NIL9 109 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 GNG7O60262 68 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 IFNA17P01571 189 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 OR5AC1P0C628 307 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 NPBWR1P48145 328 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 SUB1P53999 127 aaKnown RBP eCLIP8.15□□□□□ -1.1
SIN3B-210ENST00000599880 DHODHQ02127 395 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 BSXQ3C1V8 233 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 OR52E5Q8NH55 327 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 RNASE11Q8TAA1 199 aaKnown RBP8.15□□□□□ -1.1
SIN3B-210ENST00000599880 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.1
SIN3B-210ENST00000599880 SCGB3A2Q96PL1 93 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 SOSTQ9BQB4 213 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 C20orf24Q9BUV8 137 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 CACFD1Q9UGQ2 172 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 SCP2D1Q9UJQ7 156 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 SELENOKQ9Y6D0 94 aa8.15□□□□□ -1.1
SIN3B-210ENST00000599880 LYSTQ99698 3801 aa8.15□□□□□ -1.11
SIN3B-210ENST00000599880 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
SIN3B-210ENST00000599880 IGHV7-4-1A0A0J9YVY3 117 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 OR4C46A6NHA9 309 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 CD5P06127 495 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 RNASE2P10153 161 aaKnown RBP8.14□□□□□ -1.11
SIN3B-210ENST00000599880 HOXA1P49639 335 aaPredicted RBP8.14□□□□□ -1.11
SIN3B-210ENST00000599880 SPCS3P61009 180 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 SPINK9Q5DT21 86 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 DUSP18Q8NEJ0 188 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 OR51S1Q8NGJ8 323 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 LHFPL5Q8TAF8 219 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 IL22RA2Q969J5 263 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 GALNT14Q96FL9 552 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 GINS3Q9BRX5 216 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 GGTLC1Q9BX51 225 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 ENY2Q9NPA8 101 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.14□□□□□ -1.11
SIN3B-210ENST00000599880 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 TMEM56-RWDD3S4R434 201 aa8.14□□□□□ -1.11
SIN3B-210ENST00000599880 IGHV3OR16-8A0A075B7F1 116 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 FABP12A6NFH5 140 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 CHEK1O14757 476 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 TNFSF8P32971 234 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 BMI1P35226 326 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 ETV6P41212 452 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 Q6ZRM9 215 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 SELENOHQ8IZQ5 122 aaKnown RBP8.13□□□□□ -1.11
SIN3B-210ENST00000599880 TMEM116Q8NCL8 245 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 MCFD2Q8NI22 146 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 IL17DQ8TAD2 202 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 DEDD2Q8WXF8 326 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 RHPN1-AS1Q9BWJ2 59 aa8.13□□□□□ -1.11
SIN3B-210ENST00000599880 RETNQ9HD89 108 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms