RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
SOX2-OT-229ENST00000598474 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 I3L2K1 104 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 UPK1BO75841 260 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 CSN3P07498 182 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR4E1P0C645 316 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 SNCAP37840 140 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 IFITM3Q01628 133 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 DHRS2Q13268 280 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 PVRIGQ6DKI7 326 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 ELOVL1Q9BW60 279 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 ENY2Q9NPA8 101 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 C21orf62Q9NYP8 219 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 HSPB7Q9UBY9 170 aa10.35□□□□□ -0.75
SOX2-OT-229ENST00000598474 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 A0A1B0GU03 582 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 CEBPZOSA8MTT3 80 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 K7EIL1 84 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 MT-CO2P00403 227 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 TCRBP04435 133 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 ASAH1Q13510 395 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 TATDN3Q17R31 274 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 PINX1Q96BK5 328 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 OR4C12Q96R67 309 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 NUDT15Q9NV35 164 aa10.34□□□□□ -0.75
SOX2-OT-229ENST00000598474 NOTCH3Q9UM47 2321 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 IGHV3-35A0A0C4DH35 117 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 TGOLN2O43493 480 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 PITX3O75364 302 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 HOXB5P09067 269 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 EDN2P20800 178 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 GGNBP1Q5YKI7 109 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 PLET1Q6UQ28 207 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 UBAC2Q8NBM4 344 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 OR1S1Q8NH92 325 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 BSCL2Q96G97 398 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 PRR25Q96S07 402 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 ATP6V0BQ99437 205 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 RBKSQ9H477 322 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 HEYLQ9NQ87 328 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 TMED3Q9Y3Q3 217 aa10.33□□□□□ -0.76
SOX2-OT-229ENST00000598474 TRAV6A0A075B6T7 132 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 LGALS9O00182 355 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 ADAP1O75689 374 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 SLC25A6P12236 298 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 ADMP35318 185 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 HTR2BP41595 481 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 Q56UQ5 140 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 UNQ9165/PRO28630Q6UXU0 137 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 OR52B4Q8NGK2 314 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 DTD1Q8TEA8 209 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 ZNF414Q96IQ9 312 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 FNDC4Q9H6D8 234 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 CACFD1Q9UGQ2 172 aa10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-229ENST00000598474 FAM240BA0A1B0GVZ2 78 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 MPTX1A8MV57 137 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 CTSGP08311 255 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 SPNP16150 400 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 MFAP4P55083 255 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 FAM106AQ4KMX7 169 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 C2orf83Q53S99 150 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 MZT2BQ6NZ67 158 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 SLC24A4Q8NFF2 622 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
SOX2-OT-229ENST00000598474 ZNF320A2RRD8 509 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 A8MWP6 167 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 CORTO00230 105 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 TXN2Q99757 166 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 SEC22CQ9BRL7 303 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
SOX2-OT-229ENST00000598474 LY86O95711 162 aa10.29□□□□□ -0.76
SOX2-OT-229ENST00000598474 H2AFB2P0C5Z0 115 aa10.29□□□□□ -0.76
SOX2-OT-229ENST00000598474 FOLR2P14207 255 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms