RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 RNASE11Q8TAA1 199 aaKnown RBP11.39□□□□□ -0.59
LIG1-214ENST00000597146 MIXL1Q9H2W2 232 aa11.39□□□□□ -0.59
LIG1-214ENST00000597146 LGALS9O00182 355 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 CLEC3BP05452 202 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 PI3P19957 117 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 PPP5CP53041 499 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 PIGPP57054 158 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 SSBP1Q04837 148 aaKnown RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 MEF2DQ14814 521 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 TRIM16LQ309B1 348 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 MAPKAPK5-AS1Q8N8E1 139 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 OR1L6Q8NGR2 347 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 MCFD2Q8NI22 146 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 LSM10Q969L4 123 aaKnown RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 ZNF486Q96H40 463 aaPredicted RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
LIG1-214ENST00000597146 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 CCDC59Q9P031 241 aaKnown RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 RSL24D1Q9UHA3 163 aaKnown RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
LIG1-214ENST00000597146 KIR2DL5BA0A0G2JN68 375 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 KIR2DL5BA0A0G2JPC4 375 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 TEX13DA0A0J9YY54 714 aaPredicted RBP11.37□□□□□ -0.59
LIG1-214ENST00000597146 A0A1B0GW64 132 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 FABP12A6NFH5 140 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 FGF2P09038 288 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 PLET1Q6UQ28 207 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 KIR2DL5AQ8N109 375 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 KIR2DL5BQ8NHK3 375 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 DYNC2LI1Q8TCX1 351 aa11.37□□□□□ -0.59
LIG1-214ENST00000597146 IGLV11-55A0A075B6I3 123 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 IGLC7A0M8Q6 106 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 M0R2N4 97 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 DEFB4AO15263 64 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 AKAIN1P0CW23 69 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 AKR1C2P52895 323 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
LIG1-214ENST00000597146 CADM3Q8N126 398 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 RRNAD1Q96FB5 475 aaKnown RBP11.36□□□□□ -0.59
LIG1-214ENST00000597146 PDCD10Q9BUL8 212 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
LIG1-214ENST00000597146 A8MWP6 167 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 H3BMQ9 156 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 IFNA17P01571 189 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 PTBP1P26599 531 aaKnown RBP eCLIP11.35□□□□□ -0.59
LIG1-214ENST00000597146 S100A5P33763 92 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 MFAP2P55001 183 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 RND3P61587 244 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 GDPD1Q8N9F7 314 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 MARCH1Q8TCQ1 289 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 MRGPRFQ96AM1 343 aa11.35□□□□□ -0.59
LIG1-214ENST00000597146 C11orf68Q9H3H3 251 aaKnown RBP11.35□□□□□ -0.59
LIG1-214ENST00000597146 MFSD2BA6NFX1 497 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 CD74P04233 296 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 GPR183P32249 361 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 TNFSF8P32971 234 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 SNCAP37840 140 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
LIG1-214ENST00000597146 WT1-ASQ06250 92 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 SP6Q3SY56 376 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 Q56UQ5 140 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 RBPMS2Q6ZRY4 209 aaKnown RBP11.34□□□□□ -0.59
LIG1-214ENST00000597146 OR2C3Q8N628 320 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 UBAC2Q8NBM4 344 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 OR13C8Q8NGS7 320 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 SMIM4Q8WVI0 70 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 MISP3Q96FF7 219 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 SEC22AQ96IW7 307 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 RARRES2Q99969 163 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 MAP6D1Q9H9H5 199 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 ENY2Q9NPA8 101 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 MCUBQ9NWR8 336 aa11.34□□□□□ -0.59
LIG1-214ENST00000597146 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 C15orf61A6NNL5 157 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 CTDSPLO15194 276 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 CTSDP07339 412 aaPredicted RBP11.33□□□□□ -0.6
LIG1-214ENST00000597146 PYDC2Q56P42 97 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 LHFPL1Q86WI0 220 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 PRRT1Q99946 306 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 TMEM14BQ9NUH8 114 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 SCP2D1Q9UJQ7 156 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
LIG1-214ENST00000597146 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
LIG1-214ENST00000597146 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 IGHV3-35A0A0C4DH35 117 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 B3GALNT1O75752 331 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.61e-16■■■■■ 45.6
LIG1-214ENST00000597146 FAAP20Q6NZ36 180 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 UNQ9165/PRO28630Q6UXU0 137 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms