RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 C4BPBP20851 252 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 RPL12P30050 165 aaKnown RBP6.88□□□□□ -1.31
SNRPA-202ENST00000596860 S100A11P31949 105 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 FOXE3Q13461 319 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 Q5BKY6 102 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 SPANXN5Q5MJ07 72 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 TEX38Q6PEX7 206 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 FAM223AQ8IWN6 122 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 OR10P1Q8NGE3 313 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 VN1R17PQ8TDU5 208 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 WIPF2Q8TF74 440 aaPredicted RBP6.88□□□□□ -1.31
SNRPA-202ENST00000596860 USMG5Q96IX5 58 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 OR4C12Q96R67 309 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 SERTAD4Q9NUC0 356 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 GAR1Q9NY12 217 aaKnown RBP6.88□□□□□ -1.31
SNRPA-202ENST00000596860 HSPB11Q9Y547 144 aa6.88□□□□□ -1.31
SNRPA-202ENST00000596860 FXYD6-FXYD2A0A087WZ82 144 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 A0A0G2JLM5 398 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 RNF222A6NCQ9 220 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 DFFBO76075 338 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 DEFA4P12838 97 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 PSMB8P28062 276 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 CAV2P51636 162 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 DLK1P80370 383 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNRPA-202ENST00000596860 CD69Q07108 199 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 ECSCRQ19T08 205 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 VWC2Q2TAL6 325 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 ETV3LQ6ZN32 361 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 Q6ZS46 218 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 KCNRGQ8N5I3 272 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 NECAP1Q8NC96 275 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 MYOZ3Q8TDC0 251 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 TMEM170AQ8WVE7 144 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 CXorf58Q96LI9 332 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 TXN2Q99757 166 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 FAM103A1Q9BTL3 118 aaKnown RBP6.87□□□□□ -1.31
SNRPA-202ENST00000596860 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
SNRPA-202ENST00000596860 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 TNFRSF19Q9NS68 423 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 CUBNO60494 3623 aa6.87□□□□□ -1.31
SNRPA-202ENST00000596860 IGSF23A1L1A6 192 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 CLPSL1A2RUU4 121 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 PSMB11A5LHX3 300 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 FAM24AA6NFZ4 105 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 SH2D7A6NKC9 451 aaPredicted RBP6.86□□□□□ -1.31
SNRPA-202ENST00000596860 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 I3L2K1 104 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 SOX15O60248 233 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 MPDU1O75352 247 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 NXPH3O95157 252 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 IFNA4P05014 189 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 AP2S1P53680 142 aaPredicted RBP6.86□□□□□ -1.31
SNRPA-202ENST00000596860 FOXL1Q12952 345 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 ZNF266Q14584 549 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 SPINK9Q5DT21 86 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
SNRPA-202ENST00000596860 TMEM116Q8NCL8 245 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 OR11H4Q8NGC9 324 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 OR1S2Q8NGQ3 325 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 LINC01006Q8NI28 216 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 DUX5Q96PT3 197 aa6.86□□□□□ -1.31
SNRPA-202ENST00000596860 TRBV7-1A0A0A6YYK4 115 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 G3V318 75 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 H3BP45 60 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 ARPC5O15511 151 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 SCGB2A1O75556 95 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 METTL15P1P0C7V9 234 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 MFAP2P55001 183 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 EIF5AP63241 154 aaKnown RBP6.85□□□□□ -1.31
SNRPA-202ENST00000596860 SLC25A24Q6NUK1 477 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 OR5T1Q8NG75 326 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 OR4X1Q8NH49 305 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 SLC35E1Q96K37 410 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 TMEM147Q9BVK8 224 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 NPVFQ9HCQ7 196 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 DMRT1Q9Y5R6 373 aa6.85□□□□□ -1.31
SNRPA-202ENST00000596860 FBN3Q75N90 2809 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 TRAV30A0A087WSZ9 112 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 SMLR1H3BR10 107 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 K7EIM0 57 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 JTBO76095 146 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 REG1AP05451 166 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 MDKP21741 143 aaPredicted RBP6.84□□□□□ -1.31
SNRPA-202ENST00000596860 OPRK1P41145 380 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 NPBWR1P48145 328 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 RAB9AP51151 201 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 MFAP4P55083 255 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 PROK1P58294 105 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 RHOGP84095 191 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 CD300CQ08708 224 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 SLC38A11Q08AI6 406 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 SLC16A13Q7RTY0 426 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 TMEM144Q7Z5S9 345 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 CENPVQ7Z7K6 275 aaPredicted RBP6.84□□□□□ -1.31
SNRPA-202ENST00000596860 HAPLN4Q86UW8 402 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 C9orf62Q8N4C0 152 aa6.84□□□□□ -1.31
SNRPA-202ENST00000596860 KLHDC1Q8N7A1 406 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms