RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 HAPLN4Q86UW8 402 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 OR1P1Q8NH06 330 aa8.49□□□□□ -1.05
LIG1-211ENST00000596457 HEYLQ9NQ87 328 aaPredicted RBP8.49□□□□□ -1.05
LIG1-211ENST00000596457 FAM240BA0A1B0GVZ2 78 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 C9orf170A2RU37 121 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 TCRBP04435 133 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 KLK9Q2XQG4 91 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 DEFB121Q5J5C9 76 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 FAM209BQ5JX69 171 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 C11orf87Q6NUJ2 197 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 MZT2BQ6NZ67 158 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 PLET1Q6UQ28 207 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 OR52B4Q8NGK2 314 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 OR9G4Q8NGQ1 327 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 MRAPQ8TCY5 172 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 VN1R17PQ8TDU5 208 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 SCARB1Q8WTV0 552 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 PRR25Q96S07 402 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 C20orf85Q9H1P6 137 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 C21orf62Q9NYP8 219 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 ZMAT5Q9UDW3 170 aaKnown RBP8.48□□□□□ -1.05
LIG1-211ENST00000596457 KLK9Q9UKQ9 250 aa8.48□□□□□ -1.05
LIG1-211ENST00000596457 A0A1B0GU03 582 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 DUXBA0A1W2PPF3 345 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 K7EIM0 57 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 UPK1BO75841 260 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 MT-CO2P00403 227 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 RNASE2P10153 161 aaKnown RBP8.47□□□□□ -1.05
LIG1-211ENST00000596457 UBE2MP61081 183 aaKnown RBP8.47□□□□□ -1.05
LIG1-211ENST00000596457 DHRS2Q13268 280 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 FAM106AQ4KMX7 169 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 NMSQ5H8A3 153 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 GGNBP1Q5YKI7 109 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 LYG2Q86SG7 212 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 OR52E5Q8NH55 327 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 COQ8AQ8NI60 647 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 HIPK2Q9H2X6 1198 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 RBKSQ9H477 322 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 PEMTQ9UBM1 199 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 TBC1D24Q9ULP9 559 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 SELENOKQ9Y6D0 94 aa8.47□□□□□ -1.05
LIG1-211ENST00000596457 PIGBOS1A0A0B4J2F0 54 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 WI2-2373I1.2A0A1W2PRP0 233 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 TGOLN2O43493 480 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 ADAP1O75689 374 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 CSN3P07498 182 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 H2AFB2P0C5Z0 115 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 EDN2P20800 178 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 INSL3P51460 131 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 MFAP4P55083 255 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 LRTM2Q8N967 370 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 UXS1Q8NBZ7 420 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 ZNF114Q8NC26 417 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 NUDT15Q9NV35 164 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 PAIP2BQ9ULR5 123 aaKnown RBP8.46□□□□□ -1.06
LIG1-211ENST00000596457 TMED3Q9Y3Q3 217 aa8.46□□□□□ -1.06
LIG1-211ENST00000596457 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 I3L2K1 104 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 GNG7O60262 68 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 IFNA10P01566 189 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 IFNA21P01568 189 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 IAPPP10997 89 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 OPRK1P41145 380 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 HTR2BP41595 481 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 IFITM3Q01628 133 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 TNFRSF9Q07011 255 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 ASAH1Q13510 395 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 MLANAQ16655 118 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 GPHB5Q86YW7 130 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 DUSP18Q8NEJ0 188 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 ENKURQ8TC29 256 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 DTD1Q8TEA8 209 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 BSCL2Q96G97 398 aaPredicted RBP8.45□□□□□ -1.06
LIG1-211ENST00000596457 SEC22CQ9BRL7 303 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 CHRDL1Q9BU40 450 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 MAGT1Q9H0U3 335 aa8.45□□□□□ -1.06
LIG1-211ENST00000596457 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
LIG1-211ENST00000596457 INS-IGF2F8WCM5 200 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 K7EIL1 84 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 SPNP16150 400 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 AARDQ4LEZ3 155 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 IL34Q6ZMJ4 242 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 SLC24A4Q8NFF2 622 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 DYNLRB2Q8TF09 96 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 CACNG8Q8WXS5 425 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 C20orf24Q9BUV8 137 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 HSPB7Q9UBY9 170 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 CACFD1Q9UGQ2 172 aa8.44□□□□□ -1.06
LIG1-211ENST00000596457 C2orf70A6NJV1 201 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 MPTX1A8MV57 137 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 FAM25EA8MYX2 175 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
LIG1-211ENST00000596457 CORTO00230 105 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 WRBO00258 174 aa8.43□□□□□ -1.06
LIG1-211ENST00000596457 NUPL2O15504 423 aaKnown RBP8.43□□□□□ -1.06
LIG1-211ENST00000596457 ZNF207O43670 478 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms