RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 ELLP55199 621 aaPredicted RBP4.38□□□□□ -1.71
SSX4B-201ENST00000595235 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
SSX4B-201ENST00000595235 SSBP1Q04837 148 aaKnown RBP4.38□□□□□ -1.71
SSX4B-201ENST00000595235 MEF2DQ14814 521 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 TRIM16LQ309B1 348 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 Q56UQ5 140 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 CASC10Q5T4H9 136 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 Q6ZRM9 215 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 CCDC71LQ8N9Z2 235 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 MUC7Q8TAX7 377 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 ZFAND1Q8TCF1 268 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 MARC2Q969Z3 335 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 PINX1Q96BK5 328 aaKnown RBP4.38□□□□□ -1.71
SSX4B-201ENST00000595235 CITED4Q96RK1 184 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 FAM110AQ9BQ89 295 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 SPATA25Q9BR10 227 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 RTBDNQ9BSG5 229 aaPredicted RBP4.38□□□□□ -1.71
SSX4B-201ENST00000595235 C20orf24Q9BUV8 137 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 C5orf66Q9H5L9 145 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 MRPL27Q9P0M9 148 aaKnown RBP4.38□□□□□ -1.71
SSX4B-201ENST00000595235 COPZ2Q9P299 210 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 UFC1Q9Y3C8 167 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 CEPT1Q9Y6K0 416 aa4.38□□□□□ -1.71
SSX4B-201ENST00000595235 ANKRD20A5PA0PJZ0 165 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 CRYM-AS1A6NIL9 109 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 DISC1C4P0D8 188 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 INS-IGF2F8WCM5 200 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 GSTZ1O43708 216 aaPredicted RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 NOL3O60936 208 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 IFNA17P01571 189 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 CTSGP08311 255 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 AKAIN1P0CW23 69 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 TNFSF8P32971 234 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 ETV6P41212 452 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 ZFAND6Q6FIF0 208 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 SELENOHQ8IZQ5 122 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 SLC35G3Q8N808 338 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 OR51S1Q8NGJ8 323 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 OR52B4Q8NGK2 314 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 OR1L6Q8NGR2 347 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 MCFD2Q8NI22 146 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 GLYATL2Q8WU03 294 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 TMEM230Q96A57 120 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 ATP6V0BQ99437 205 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 SOSTQ9BQB4 213 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 NXF2Q9GZY0 626 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 TMEM222Q9H0R3 208 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 NAA60Q9H7X0 242 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 DAZ1Q9NQZ3 744 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 PRR13Q9NZ81 148 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 UBQLN2Q9UHD9 624 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
SSX4B-201ENST00000595235 C14orf166Q9Y224 244 aaKnown RBP4.37□□□□□ -1.71
SSX4B-201ENST00000595235 IGHV3-49A0A0A0MS15 119 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 TRAV25A0A0B4J276 109 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 C15orf62A8K5M9 175 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 K7EMT4 169 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 TSPAN4O14817 238 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 NUPL2O15504 423 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 GNG7O60262 68 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 B3GALNT1O75752 331 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 ATG12O94817 140 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 NXPH3O95157 252 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 CDS2O95674 445 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 FCGR2BP31994 310 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 HOXA1P49639 335 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 MFAP4P55083 255 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 ERHP84090 104 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RELQ04864 619 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 SURF2Q15527 256 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 ZNF79Q15937 498 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 BSXQ3C1V8 233 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 ODF3L2Q3SX64 289 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 TMEM268Q5VZI3 342 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 PVRIGQ6DKI7 326 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RBPMS2Q6ZRY4 209 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 SLC16A13Q7RTY0 426 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RNASE11Q8TAA1 199 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RBPMSQ93062 196 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 TRIM63Q969Q1 353 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 GPR146Q96CH1 333 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 OR10C1Q96KK4 312 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RNF2Q99496 336 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 TXN2Q99757 166 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 SPAG8Q99932 426 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 PRRT1Q99946 306 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 PDCD10Q9BUL8 212 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RBM38Q9H0Z9 239 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 FNDC4Q9H6D8 234 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 GAR1Q9NY12 217 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RABL2AQ9UBK7 228 aaPredicted RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 CACNG5Q9UF02 275 aa4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RSL24D1Q9UHA3 163 aaKnown RBP4.36□□□□□ -1.71
SSX4B-201ENST00000595235 RABL2BQ9UNT1 228 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms