RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 CYB5BO43169 146 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 TAS2R46P59540 309 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 RNASE12Q5GAN4 147 aaKnown RBP7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 LAMTOR1Q6IAA8 161 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 SPSB3Q6PJ21 355 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 SNX29P2Q8IUI4 249 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 CMTM1Q8IZ96 169 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 CADM3Q8N126 398 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 FAM24BQ8N5W8 94 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 BORCS5Q969J3 196 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 LSM10Q969L4 123 aaKnown RBP7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 RARRES2Q99969 163 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 RHPN1-AS1Q9BWJ2 59 aa7.06□□□□□ -1.28
NOTCH3-202ENST00000595045 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 A0A087WXM4 84 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 IGHV3-49A0A0A0MS15 119 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 TMEM127O75204 238 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 IGHV3-48P01763 117 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 APOHP02749 345 aaPredicted RBP7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 RBMY1A1P0DJD3 496 aaKnown RBP7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 RBMY1CP0DJD4 496 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 NAT1P18440 290 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 TFPI2P48307 235 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 NCS1P62166 190 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 RBMY1FQ15415 496 aaKnown RBP7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 THOC7Q6I9Y2 204 aaKnown RBP7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 TBC1D26Q86UD7 250 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 Q8NAQ8 132 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 TMEM56Q96MV1 263 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 ANAPC10Q9UM13 185 aa7.05□□□□□ -1.28
NOTCH3-202ENST00000595045 IGHV3OR16-13A0A075B7E8 117 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 IGHV3-74A0A0B4J1X5 117 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 SMIM31A0A1B0GVY4 71 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 M0QYG6 137 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 M0R2N4 97 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 YIF1AO95070 293 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 VBP1P61758 197 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 IZUMO4Q1ZYL8 232 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 SPINK9Q5DT21 86 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 H2BFWTQ7Z2G1 175 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 HSD17B13Q7Z5P4 300 aaPredicted RBP7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 TMEM116Q8NCL8 245 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 OR4A16Q8NH70 328 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 GPX8Q8TED1 209 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 SLC25A46Q96AG3 418 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 PINX1Q96BK5 328 aaKnown RBP7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 VSIRQ9H7M9 311 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 VCX3AQ9NNX9 186 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 TMEM14BQ9NUH8 114 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 PRNDQ9UKY0 176 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 SRRM2Q9UQ35 2752 aaKnown RBP7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
NOTCH3-202ENST00000595045 C15orf61A6NNL5 157 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 FAM25AB3EWG3 89 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 FAM25CB3EWG5 89 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 FAM25GB3EWG6 89 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 C11orf94C9JXX5 98 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 HPGDSO60760 199 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 IGKV1-39P01597 117 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 IGKV1D-39P04432 117 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 ELK1P19419 428 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 S100GP29377 79 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 LPCAT3Q6P1A2 487 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 OR1P1Q8NH06 330 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 ST8SIA2Q92186 375 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 MRGPRFQ96AM1 343 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 TSC22D3Q99576 134 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 FUNDC2Q9BWH2 189 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 NXF2Q9GZY0 626 aaKnown RBP7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 FKBP11Q9NYL4 201 aa7.03□□□□□ -1.28
NOTCH3-202ENST00000595045 IGHV4-4A0A075B6R2 117 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 ELOA3CA0A087WX78 387 aaPredicted RBP7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 NUPL2O15504 423 aaKnown RBP7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 TNFAIP8O95379 198 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 MT-CO2P00403 227 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 PGAM2P15259 253 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 PI3P19957 117 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 MFAP4P55083 255 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 LEMD1Q68G75 181 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 CSNK1G2-AS1Q8NCQ2 148 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 SEC22AQ96IW7 307 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 SCRT1Q9BWW7 348 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 MS4A6AQ9H2W1 248 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 HRH4Q9H3N8 390 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 ZFAND3Q9H8U3 227 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 X6R8D5 127 aa7.02□□□□□ -1.29
NOTCH3-202ENST00000595045 TRAV14DV4A0A0A6YYC5 116 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 IGHV4-28A0A0C4DH34 117 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 IGHV3-66A0A0C4DH42 116 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 A0A1B0GU03 582 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 DFFBO76075 338 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 CA1P00915 261 aaPredicted RBP7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 APOA1P02647 267 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 C4BPBP20851 252 aa7.01□□□□□ -1.29
NOTCH3-202ENST00000595045 RCVRNP35243 200 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms