RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TRGV10A0A0A0MS01 117 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 TRBV9A0A0B4J1U6 114 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 LRRC30A6NM36 301 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 M0R1X1 148 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 FCGR3BO75015 233 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 TMEM11P17152 192 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 DUTP33316 252 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 CCL17Q92583 94 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 NGBQ9NPG2 151 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 KCNIP2Q9NS61 270 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 KBTBD11-OT1A0A1B0GTJ5 212 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 DLL1O00548 723 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 HMGB3O15347 200 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 C1QTNF9P0C862 333 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 TSPOP30536 169 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 GNB1P62873 340 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 UNQ5815/PRO19632Q6UWF5 114 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 ZNF788Q6ZQV5 615 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 H2BFWTQ7Z2G1 175 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 IFI27L2Q9H2X8 130 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 SEPSECSQ9HD40 501 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 CLN8Q9UBY8 286 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 ITPR1Q14643 2758 aa13.99□□□□□ -0.17
SHKBP1-205ENST00000594973 IGHV1-69-2A0A0G2JMI3 117 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 SHISA9B4DS77 424 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 CIDEAO60543 219 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 P0C879 139 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 CGB3P0DN86 165 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 CGB7P0DN87 165 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 CBLN1P23435 193 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 SPINK9Q5DT21 86 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 TMEM14EPQ6UXP3 125 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 RAI1Q7Z5J4 1906 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 LINC01560Q8TB33 94 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 VPS25Q9BRG1 176 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 ANKHD1Q8IWZ3 2542 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 TPRP12270 2363 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 IGHV2-26A0A0B4J1V2 119 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 FAM90A26D6RGX4 464 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 E7EQL1 145 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 KLRB1Q12918 225 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 TEX36Q5VZQ5 186 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 SSX8Q7RTT4 187 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 SVIPQ8NHG7 77 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 NRN1Q9NPD7 142 aa13.98□□□□□ -0.17
SHKBP1-205ENST00000594973 CBY3A6NI87 242 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 CCL21O00585 134 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 GRNP28799 593 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 RHOGP84095 191 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 C1orf229Q6ZS94 237 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 OR10G8Q8NGN5 311 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 TMEM147Q9BVK8 224 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 CSTL1Q9H114 145 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 DYNLRB1Q9NP97 96 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 IL36BQ9NZH7 164 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 MRPL27Q9P0M9 148 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 RNF114Q9Y508 228 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 VSTM5A8MXK1 200 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 RPL19P84098 196 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 ZNF90Q03938 601 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 CT45A1Q5HYN5 189 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 OR10J3Q5JRS4 329 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 VKORC1L1Q8N0U8 176 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 CT45A3Q8NHU0 189 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 ZDHHC16Q969W1 377 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 TBL2Q9Y4P3 447 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 COL6A6A6NMZ7 2263 aa13.97□□□□□ -0.17
SHKBP1-205ENST00000594973 RBFOX2O43251 390 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHKBP1-205ENST00000594973 CA7P43166 264 aa13.96□□□□□ -0.17
SHKBP1-205ENST00000594973 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-205ENST00000594973 PRRX1P54821 245 aa13.96□□□□□ -0.17
SHKBP1-205ENST00000594973 RNASE6Q93091 150 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-205ENST00000594973 DOCK11Q5JSL3 2073 aa13.96□□□□□ -0.18
SHKBP1-205ENST00000594973 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.96□□□□□ -0.18
SHKBP1-205ENST00000594973 HSBP1L1C9JCN9 74 aa13.96□□□□□ -0.18
SHKBP1-205ENST00000594973 NDUFB4O95168 129 aa13.96□□□□□ -0.18
SHKBP1-205ENST00000594973 RPS16P62249 146 aaKnown RBP13.96□□□□□ -0.18
SHKBP1-205ENST00000594973 FCN1O00602 326 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 RAB29O14966 203 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 ZG16O60844 167 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 PLAUP00749 431 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 HLA-DRB5Q30154 266 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 OCIAD2Q56VL3 154 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 PRAMEF5Q5TYX0 476 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 GNB1LQ9BYB4 327 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 TRAV38-1A0A0B4J264 116 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 SAA2P0DJI9 122 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 PMCHL1Q16048 86 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 C19orf35Q6ZS72 473 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 KCNS1Q96KK3 526 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 FAM103A1Q9BTL3 118 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 RAB9BQ9NP90 201 aa13.95□□□□□ -0.18
SHKBP1-205ENST00000594973 PPIAL4EA0A075B759 164 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 IGLC7A0M8Q6 106 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 PPIAL4DF5H284 164 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 TMEM178BH3BS89 294 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms