RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SLC16A13Q7RTY0 426 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 UXS1Q8NBZ7 420 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 RBPMSQ93062 196 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 RTBDNQ9BSG5 229 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 C5orf66Q9H5L9 145 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 GPR132Q9UNW8 380 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 KCNIP3Q9Y2W7 256 aa13.4□□□□□ -0.26
SHKBP1-204ENST00000594862 NUPL2O15504 423 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 ST8SIA3O43173 380 aa13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 UNQ9165/PRO28630Q6UXU0 137 aa13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 UBAC2Q8NBM4 344 aa13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 IL22RA2Q969J5 263 aa13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 NEURL2Q9BR09 285 aa13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
SHKBP1-204ENST00000594862 A0A0B4J293 547 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 ZNF785A8K8V0 405 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 I3L2K1 104 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 K7EMT4 169 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 SCGB2A1O75556 95 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 SRPXP78539 464 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 AARDQ4LEZ3 155 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 TMEM61Q8N0U2 210 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 OR52E5Q8NH55 327 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 CACNG8Q8WXS5 425 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-204ENST00000594862 C15orf62A8K5M9 175 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 MT-CO2P00403 227 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 ANXA3P12429 323 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 SPCS3P61009 180 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 IZUMO4Q1ZYL8 232 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 TM4SF20Q53R12 229 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 PYDC2Q56P42 97 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 BTNL8Q6UX41 500 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 RBPMS2Q6ZRY4 209 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 GALNT14Q96FL9 552 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 RBM38Q9H0Z9 239 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 MLXQ9UH92 298 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 TMEM56-RWDD3S4R434 201 aa13.37□□□□□ -0.27
SHKBP1-204ENST00000594862 IGHV3-21A0A0B4J1V1 117 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 GNG7O60262 68 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 NPBWR1P48145 328 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 TMEM268Q5VZI3 342 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 LAMTOR1Q6IAA8 161 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 TOMM5Q8N4H5 51 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 DUSP18Q8NEJ0 188 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 OR52B4Q8NGK2 314 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 PINX1Q96BK5 328 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 WDR89Q96FK6 387 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 V9GYH0 126 aa13.36□□□□□ -0.27
SHKBP1-204ENST00000594862 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 CTSGP08311 255 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 EDN2P20800 178 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 BMI1P35226 326 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 ADMP35318 185 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 SPANXN2Q5MJ10 180 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 SELENOHQ8IZQ5 122 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 TRIM63Q969Q1 353 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 C20orf24Q9BUV8 137 aa13.35□□□□□ -0.27
SHKBP1-204ENST00000594862 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 ETV6P41212 452 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 HTR2BP41595 481 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 KLF9Q13886 244 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 PVRIGQ6DKI7 326 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 LHFPL5Q8TAF8 219 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 GINS3Q9BRX5 216 aa13.34□□□□□ -0.27
SHKBP1-204ENST00000594862 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 CD7P09564 240 aa13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 HAGHQ16775 308 aa13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 CCDC190Q86UF4 302 aa13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 NOXA1Q86UR1 476 aa13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 CACNG5Q9UF02 275 aa13.33□□□□□ -0.28
SHKBP1-204ENST00000594862 A0A0B4J2A0 478 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 RPS10-NUDT3A0A1W2PQS6 291 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 TSPAN4O14817 238 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 SCAF4O95104 1147 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 CD5P06127 495 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 SULT1A3P0DMM9 295 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 SULT1A4P0DMN0 295 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 AKR1C4P17516 323 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 TMEM187Q14656 261 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 BSXQ3C1V8 233 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 LGI3Q8N145 548 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 TMEM230Q96A57 120 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 OR10C1Q96KK4 312 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 HEYLQ9NQ87 328 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-204ENST00000594862 SHPKQ9UHJ6 478 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms