RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 C8orf88P0DMB2 117 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 S100A5P33763 92 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 DHODHQ02127 395 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
USE1-205ENST00000594724 SPSB3Q6PJ21 355 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 BTNL8Q6UX41 500 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 ZNF114Q8NC26 417 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
USE1-205ENST00000594724 TMEM230Q96A57 120 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 NEURL2Q9BR09 285 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 PRR13Q9NZ81 148 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
USE1-205ENST00000594724 CTSGP08311 255 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 SNCAP37840 140 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 MFAP4P55083 255 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 ELLP55199 621 aaPredicted RBP11.1□□□□□ -0.63
USE1-205ENST00000594724 KLF9Q13886 244 aaPredicted RBP11.1□□□□□ -0.63
USE1-205ENST00000594724 ZNF79Q15937 498 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 TMEM268Q5VZI3 342 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 TMEM190Q8WZ59 177 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 TRIM63Q969Q1 353 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 GPR146Q96CH1 333 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 RCHY1Q96PM5 261 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 C20orf24Q9BUV8 137 aa11.1□□□□□ -0.63
USE1-205ENST00000594724 MRPL27Q9P0M9 148 aaKnown RBP11.1□□□□□ -0.63
USE1-205ENST00000594724 NDUFA4O00483 81 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 ZNF207O43670 478 aaKnown RBP11.09□□□□□ -0.63
USE1-205ENST00000594724 SCAF4O95104 1147 aaKnown RBP11.09□□□□□ -0.63
USE1-205ENST00000594724 AKR1C4P17516 323 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 HOXA1P49639 335 aaPredicted RBP11.09□□□□□ -0.63
USE1-205ENST00000594724 TMEM187Q14656 261 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 FAM219AQ8IW50 185 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 TOMM5Q8N4H5 51 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 MARC2Q969Z3 335 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 SCGB3A2Q96PL1 93 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 WFDC10AQ9H1F0 79 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.09□□□□□ -0.63
USE1-205ENST00000594724 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
USE1-205ENST00000594724 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 INS-IGF2F8WCM5 200 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
USE1-205ENST00000594724 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
USE1-205ENST00000594724 HAGHQ16775 308 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 TXN2Q99757 166 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 DAZ1Q9NQZ3 744 aaKnown RBP11.08□□□□□ -0.64
USE1-205ENST00000594724 CACNG5Q9UF02 275 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
USE1-205ENST00000594724 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
USE1-205ENST00000594724 FCGR2BP31994 310 aaPredicted RBP11.07□□□□□ -0.64
USE1-205ENST00000594724 FAUP35544 74 aaKnown RBP11.07□□□□□ -0.64
USE1-205ENST00000594724 SUB1P53999 127 aaKnown RBP eCLIP11.07□□□□□ -0.64
USE1-205ENST00000594724 SPCS3P61009 180 aa11.07□□□□□ -0.64
USE1-205ENST00000594724 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
USE1-205ENST00000594724 MLANAQ16655 118 aa11.07□□□□□ -0.64
USE1-205ENST00000594724 RBPMS2Q6ZRY4 209 aaKnown RBP11.07□□□□□ -0.64
USE1-205ENST00000594724 GALNT14Q96FL9 552 aa11.07□□□□□ -0.64
USE1-205ENST00000594724 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
USE1-205ENST00000594724 K7EMT4 169 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 GNG7O60262 68 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 YIF1AO95070 293 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 NXPH3O95157 252 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 AP3S2P59780 193 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 RELQ04864 619 aaPredicted RBP11.06□□□□□ -0.64
USE1-205ENST00000594724 AARDQ4LEZ3 155 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 PVRIGQ6DKI7 326 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 SLC16A13Q7RTY0 426 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 OR52B4Q8NGK2 314 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
USE1-205ENST00000594724 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 C15orf62A8K5M9 175 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 CEBPZOSA8MTT3 80 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 SPANXN2Q5MJ10 180 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 LYZL2Q7Z4W2 148 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 TMED4Q7Z7H5 227 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 DUSP18Q8NEJ0 188 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 IL22RA2Q969J5 263 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 SRRQ9GZT4 340 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 FNDC4Q9H6D8 234 aaPredicted RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 SRD5A3Q9H8P0 318 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 HEYLQ9NQ87 328 aaPredicted RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 MRPL36Q9P0J6 103 aaKnown RBP11.05□□□□□ -0.64
USE1-205ENST00000594724 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
USE1-205ENST00000594724 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
USE1-205ENST00000594724 TMEM50AO95807 157 aa11.04□□□□□ -0.64
USE1-205ENST00000594724 SULT1A3P0DMM9 295 aa11.04□□□□□ -0.64
USE1-205ENST00000594724 SULT1A4P0DMN0 295 aa11.04□□□□□ -0.64
USE1-205ENST00000594724 NPBWR1P48145 328 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms