RNA–Protein interactions for RNA: ENST00000593549.5

SOX2-OT-220, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 756 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-220ENST00000593549 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
SOX2-OT-220ENST00000593549 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
SOX2-OT-220ENST00000593549 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 I3L2K1 104 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 UPK1BO75841 260 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 CSN3P07498 182 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 OR4E1P0C645 316 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 SNCAP37840 140 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 IFITM3Q01628 133 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 DHRS2Q13268 280 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 PVRIGQ6DKI7 326 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 ELOVL1Q9BW60 279 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 ENY2Q9NPA8 101 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 C21orf62Q9NYP8 219 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 HSPB7Q9UBY9 170 aa10.35□□□□□ -0.75
SOX2-OT-220ENST00000593549 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 A0A1B0GU03 582 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 CEBPZOSA8MTT3 80 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 K7EIL1 84 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 MT-CO2P00403 227 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 TCRBP04435 133 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 ASAH1Q13510 395 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 TATDN3Q17R31 274 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 LYG2Q86SG7 212 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 GPHB5Q86YW7 130 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 PINX1Q96BK5 328 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 OR4C12Q96R67 309 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 NUDT15Q9NV35 164 aa10.34□□□□□ -0.75
SOX2-OT-220ENST00000593549 NOTCH3Q9UM47 2321 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 IGHV3-35A0A0C4DH35 117 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 TGOLN2O43493 480 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 PITX3O75364 302 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 HOXB5P09067 269 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 EDN2P20800 178 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 GGNBP1Q5YKI7 109 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 PLET1Q6UQ28 207 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 UBAC2Q8NBM4 344 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 OR1S1Q8NH92 325 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 BSCL2Q96G97 398 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 PRR25Q96S07 402 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 ATP6V0BQ99437 205 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 RBKSQ9H477 322 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 HEYLQ9NQ87 328 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 TMED3Q9Y3Q3 217 aa10.33□□□□□ -0.76
SOX2-OT-220ENST00000593549 TRAV6A0A075B6T7 132 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 LGALS9O00182 355 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 ADAP1O75689 374 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 SLC25A6P12236 298 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 ADMP35318 185 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 HTR2BP41595 481 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 Q56UQ5 140 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 UNQ9165/PRO28630Q6UXU0 137 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 OR52B4Q8NGK2 314 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 DTD1Q8TEA8 209 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 ZNF414Q96IQ9 312 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 FNDC4Q9H6D8 234 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 CACFD1Q9UGQ2 172 aa10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
SOX2-OT-220ENST00000593549 FAM240BA0A1B0GVZ2 78 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 MPTX1A8MV57 137 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 CTSGP08311 255 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 SPNP16150 400 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 MFAP4P55083 255 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 FAM106AQ4KMX7 169 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 C2orf83Q53S99 150 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 MZT2BQ6NZ67 158 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 SLC24A4Q8NFF2 622 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
SOX2-OT-220ENST00000593549 ZNF320A2RRD8 509 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 A8MWP6 167 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 CORTO00230 105 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 TXN2Q99757 166 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 SEC22CQ9BRL7 303 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
SOX2-OT-220ENST00000593549 LY86O95711 162 aa10.29□□□□□ -0.76
SOX2-OT-220ENST00000593549 H2AFB2P0C5Z0 115 aa10.29□□□□□ -0.76
SOX2-OT-220ENST00000593549 FOLR2P14207 255 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms