RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 MYO5AQ9Y4I1 1855 aaKnown RBP3.4□□□□□ -1.87
SMAD4-216ENST00000593223 HES2Q9Y543 173 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 ANK2Q01484 3957 aa3.4□□□□□ -1.87
SMAD4-216ENST00000593223 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
SMAD4-216ENST00000593223 COL1A2P08123 1366 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
SMAD4-216ENST00000593223 WI2-2373I1.2A0A1W2PRP0 233 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 PLAC8L1A1L4L8 177 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.39□□□□□ -1.87
SMAD4-216ENST00000593223 H3BSA7 217 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 CDS2O95674 445 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 HSPB1P04792 205 aaKnown RBP3.39□□□□□ -1.87
SMAD4-216ENST00000593223 CECR9P0C854 216 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 IGLL1P15814 213 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 VDAC1P21796 283 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 NPY1RP25929 384 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 CNTFRP26992 372 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 BLVRBP30043 206 aaPredicted RBP3.39□□□□□ -1.87
SMAD4-216ENST00000593223 CCR2P41597 374 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 VDAC2P45880 294 aaPredicted RBP3.39□□□□□ -1.87
SMAD4-216ENST00000593223 AKR1D1P51857 326 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 NDUFA8P51970 172 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF763Q0D2J5 394 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 RGNQ15493 299 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 C1orf100Q5SVJ3 147 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM69Q5SWH9 247 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 IBA57Q5T440 356 aaKnown RBP3.39□□□□□ -1.87
SMAD4-216ENST00000593223 BAP18Q8IXM2 172 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 IFT20Q8IY31 132 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 CEND1Q8N111 149 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 SLC25A45Q8N413 288 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 OR11H7Q8NGC8 314 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 OR8B12Q8NGG6 310 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 OR4C6Q8NH72 309 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 ACOT12Q8WYK0 555 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 SLC7A6Q92536 515 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 FRZBQ92765 325 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 ARL11Q969Q4 196 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 TM4SF18Q96CE8 201 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 C16orf74Q96GX8 76 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 SLC35E1Q96K37 410 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 SMIM8Q96KF7 97 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 GPR82Q96P67 336 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 OR52B2Q96RD2 323 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF649Q9BS31 505 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 SFXN3Q9BWM7 321 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 SRMSQ9H3Y6 488 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF702PQ9H963 129 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 NIT2Q9NQR4 276 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 MARCH5Q9NX47 278 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 RPS6KB2Q9UBS0 482 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
SMAD4-216ENST00000593223 RAI1Q7Z5J4 1906 aaPredicted RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV1OR15-1A0A075B7D0 117 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 C20orf202A1L168 122 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 OR4C45A6NMZ5 311 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 F6UZH7 168 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 C8GP07360 202 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 CTLA4P16410 223 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 G6PCP35575 357 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 HSPA9P38646 679 aaKnown RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 RPL35P42766 123 aaKnown RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 P2RX1P51575 399 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 SNRPD2P62316 118 aaKnown RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 RPS21P63220 83 aaKnown RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 ARFRP1Q13795 201 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 HERPUD1Q15011 391 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 JOSD1Q15040 202 aaPredicted RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 SSX1Q16384 188 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 LCN8Q6JVE9 175 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 ARL9Q6T311 187 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 H2AFVQ71UI9 128 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 NUP35Q8NFH5 326 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 OR51H1Q8NH63 302 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 OR9G1Q8NH87 305 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 GEMIN6Q8WXD5 167 aaKnown RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 DCUN1D4Q92564 292 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 PTX4Q96A99 478 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 LINC00470Q9BZP3 86 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM222Q9H0R3 208 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 MED11Q9P086 117 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 FIS1Q9Y3D6 152 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 NSD1Q96L73 2696 aaPredicted RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 MYH8P13535 1937 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 PTPRDP23468 1912 aa3.38□□□□□ -1.87
SMAD4-216ENST00000593223 YLPM1P49750 1951 aaKnown RBP3.38□□□□□ -1.87
SMAD4-216ENST00000593223 PHF3Q92576 2039 aaKnown RBP3.37□□□□□ -1.87
SMAD4-216ENST00000593223 A0A087WUU8 490 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TRAV8-3A0A0A6YYJ7 113 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV7-81A0A0B4J1V7 117 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 A0A0G2JN53 185 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 A0A0J9YXV3 536 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 A0A0J9YY10 115 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 A0A1B0GX78 115 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 KNCNA6PVL3 124 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF850A8MQ14 1090 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 F5H5P2 479 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 H3BP45 60 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms