RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 BSCL2Q96G97 398 aaPredicted RBP11.89□□□□□ -0.51
LIG3-215ENST00000592690 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
LIG3-215ENST00000592690 CACNG5Q9UF02 275 aa11.89□□□□□ -0.51
LIG3-215ENST00000592690 KCNIP3Q9Y2W7 256 aa11.89□□□□□ -0.51
LIG3-215ENST00000592690 INS-IGF2F8WCM5 200 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 MT-CO2P00403 227 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
LIG3-215ENST00000592690 CBLN1P23435 193 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 ADMP35318 185 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 TM4SF20Q53R12 229 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 Q56UQ5 140 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 TRIQKQ629K1 86 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 Q8N1Y9 231 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 IL22RA2Q969J5 263 aa11.88□□□□□ -0.51
LIG3-215ENST00000592690 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
LIG3-215ENST00000592690 ZNF436Q9C0F3 470 aaPredicted RBP11.88□□□□□ -0.51
LIG3-215ENST00000592690 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
LIG3-215ENST00000592690 NXPH3O95157 252 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 SNCAP37840 140 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 CCR6P51684 374 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 SPCS3P61009 180 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 LYZL2Q7Z4W2 148 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 OR2K2Q8NGT1 345 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 ATP6V0BQ99437 205 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 ASCL2Q99929 193 aa11.87□□□□□ -0.51
LIG3-215ENST00000592690 A0A0B4J2A0 478 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 CTSGP08311 255 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 FRMD6-AS1P0C7T7 363 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 INPP1P49441 399 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 NMSQ5H8A3 153 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 OR52E5Q8NH55 327 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
LIG3-215ENST00000592690 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 MLXQ9UH92 298 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 SHPKQ9UHJ6 478 aa11.86□□□□□ -0.51
LIG3-215ENST00000592690 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 SULT1A3P0DMM9 295 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 SULT1A4P0DMN0 295 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 ANXA3P12429 323 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 MFAP4P55083 255 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
LIG3-215ENST00000592690 BSXQ3C1V8 233 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 LGI3Q8N145 548 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
LIG3-215ENST00000592690 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
LIG3-215ENST00000592690 NDUFA4O00483 81 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 IL7P13232 177 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 VAMP1P23763 118 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 FCGR2BP31994 310 aaPredicted RBP11.84□□□□□ -0.51
LIG3-215ENST00000592690 ELLP55199 621 aaPredicted RBP11.84□□□□□ -0.51
LIG3-215ENST00000592690 SRPXP78539 464 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 PPP1R1AQ13522 171 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 ANKRD55Q3KP44 614 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 BTNL8Q6UX41 500 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 TMEM61Q8N0U2 210 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 WDR89Q96FK6 387 aaPredicted RBP11.84□□□□□ -0.51
LIG3-215ENST00000592690 TXN2Q99757 166 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 FNDC4Q9H6D8 234 aaPredicted RBP11.84□□□□□ -0.51
LIG3-215ENST00000592690 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
LIG3-215ENST00000592690 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
LIG3-215ENST00000592690 NAP1L6A6NFF2 107 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 CEBPZOSA8MTT3 80 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 NUPL2O15504 423 aaKnown RBP11.83□□□□□ -0.52
LIG3-215ENST00000592690 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
LIG3-215ENST00000592690 BTCP35070 178 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
LIG3-215ENST00000592690 SMCO1Q147U7 214 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 GUCA2BQ16661 112 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 SBSPONQ8IVN8 264 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 C20orf24Q9BUV8 137 aa11.83□□□□□ -0.52
LIG3-215ENST00000592690 HEYLQ9NQ87 328 aaPredicted RBP11.83□□□□□ -0.52
LIG3-215ENST00000592690 DAZ1Q9NQZ3 744 aaKnown RBP11.83□□□□□ -0.52
LIG3-215ENST00000592690 MRPL36Q9P0J6 103 aaKnown RBP11.83□□□□□ -0.52
LIG3-215ENST00000592690 MRPL27Q9P0M9 148 aaKnown RBP11.83□□□□□ -0.52
LIG3-215ENST00000592690 CORTO00230 105 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 GNG7O60262 68 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 NDUFB6O95139 128 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 SFT2D2O95562 160 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 CD81P60033 236 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 TNFRSF9Q07011 255 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 MLANAQ16655 118 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 MARC2Q969Z3 335 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 FLVCR2Q9UPI3 526 aa11.82□□□□□ -0.52
LIG3-215ENST00000592690 DUXBA0A1W2PPF3 345 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 A8MZ25 164 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms