RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RBMY1BA6NDE4 496 aaKnown RBP10.4□□□□□ -0.74
APOC1-208ENST00000592535 RBMY1EA6NEQ0 496 aaKnown RBP10.4□□□□□ -0.74
APOC1-208ENST00000592535 DISC1C4P0D8 188 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 IGHV3-48P01763 117 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 CTSGP08311 255 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 RBMY1DP0C7P1 496 aaKnown RBP10.4□□□□□ -0.74
APOC1-208ENST00000592535 AKAIN1P0CW23 69 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 UCP1P25874 307 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 ETV6P41212 452 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 ERHP84090 104 aaKnown RBP10.4□□□□□ -0.74
APOC1-208ENST00000592535 SLC16A13Q7RTY0 426 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 OR52B4Q8NGK2 314 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 ZNF414Q96IQ9 312 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 RTBDNQ9BSG5 229 aaPredicted RBP10.4□□□□□ -0.74
APOC1-208ENST00000592535 C20orf24Q9BUV8 137 aa10.4□□□□□ -0.74
APOC1-208ENST00000592535 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
APOC1-208ENST00000592535 ZNF207O43670 478 aaKnown RBP10.39□□□□□ -0.75
APOC1-208ENST00000592535 ATG12O94817 140 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 MT-CO2P00403 227 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 CASC10Q5T4H9 136 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 RBPMS2Q6ZRY4 209 aaKnown RBP10.39□□□□□ -0.75
APOC1-208ENST00000592535 SLC35G3Q8N808 338 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 PINX1Q96BK5 328 aaKnown RBP10.39□□□□□ -0.75
APOC1-208ENST00000592535 HIPK2Q9H2X6 1198 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 C5orf66Q9H5L9 145 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 EDA2RQ9HAV5 297 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 RABL2AQ9UBK7 228 aaPredicted RBP10.39□□□□□ -0.75
APOC1-208ENST00000592535 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
APOC1-208ENST00000592535 C14orf166Q9Y224 244 aaKnown RBP10.39□□□□□ -0.75
APOC1-208ENST00000592535 GSTZ1O43708 216 aaPredicted RBP10.38□□□□□ -0.75
APOC1-208ENST00000592535 B3GALNT1O75752 331 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 IFNA17P01571 189 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 FCGR2BP31994 310 aaPredicted RBP10.38□□□□□ -0.75
APOC1-208ENST00000592535 MFAP4P55083 255 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 SURF2Q15527 256 aaPredicted RBP10.38□□□□□ -0.75
APOC1-208ENST00000592535 RNASE11Q8TAA1 199 aaKnown RBP10.38□□□□□ -0.75
APOC1-208ENST00000592535 LHFPL5Q8TAF8 219 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 TXN2Q99757 166 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 TMEM222Q9H0R3 208 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 NAA60Q9H7X0 242 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 GAR1Q9NY12 217 aaKnown RBP10.38□□□□□ -0.75
APOC1-208ENST00000592535 GPR132Q9UNW8 380 aa10.38□□□□□ -0.75
APOC1-208ENST00000592535 TEX13DA0A0J9YY54 714 aaPredicted RBP10.37□□□□□ -0.75
APOC1-208ENST00000592535 ANKRD20A5PA0PJZ0 165 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 INS-IGF2F8WCM5 200 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 K7EMT4 169 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
APOC1-208ENST00000592535 CDS2O95674 445 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 S100A5P33763 92 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 ANKRD55Q3KP44 614 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 Q6ZRM9 215 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 OR51S1Q8NGJ8 323 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 GLYATL2Q8WU03 294 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
APOC1-208ENST00000592535 PRRT1Q99946 306 aa10.37□□□□□ -0.75
APOC1-208ENST00000592535 NBEAL2Q6ZNJ1 2754 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 FABP12A6NFH5 140 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 CRYM-AS1A6NIL9 109 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 C15orf62A8K5M9 175 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 GNG7O60262 68 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 RNASE2P10153 161 aaKnown RBP10.36□□□□□ -0.75
APOC1-208ENST00000592535 LYL1P12980 280 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 SNCAP37840 140 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 HOXA1P49639 335 aaPredicted RBP10.36□□□□□ -0.75
APOC1-208ENST00000592535 RELQ04864 619 aaPredicted RBP10.36□□□□□ -0.75
APOC1-208ENST00000592535 SELENOHQ8IZQ5 122 aaKnown RBP10.36□□□□□ -0.75
APOC1-208ENST00000592535 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
APOC1-208ENST00000592535 V9GYH0 126 aa10.36□□□□□ -0.75
APOC1-208ENST00000592535 TSPAN4O14817 238 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 YIF1AO95070 293 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 DHODHQ02127 395 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 TMEM268Q5VZI3 342 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 PVRIGQ6DKI7 326 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 LAMTOR1Q6IAA8 161 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 S100ZQ8WXG8 99 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 RBPMSQ93062 196 aaKnown RBP10.35□□□□□ -0.75
APOC1-208ENST00000592535 TMEM230Q96A57 120 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 ENY2Q9NPA8 101 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 UBQLN2Q9UHD9 624 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 SMPXQ9UHP9 88 aa10.35□□□□□ -0.75
APOC1-208ENST00000592535 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 IGHV7-4-1A0A0J9YVY3 117 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 SUB1P53999 127 aaKnown RBP eCLIP10.34□□□□□ -0.75
APOC1-208ENST00000592535 AARDQ4LEZ3 155 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 DUSP18Q8NEJ0 188 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 GPR146Q96CH1 333 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 OR10C1Q96KK4 312 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 RNF2Q99496 336 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
APOC1-208ENST00000592535 RHPN1-AS1Q9BWJ2 59 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 MCUBQ9NWR8 336 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 PRR13Q9NZ81 148 aa10.34□□□□□ -0.75
APOC1-208ENST00000592535 CACNG5Q9UF02 275 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms