RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRIM63Q969Q1 353 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 MARC2Q969Z3 335 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 TP53RKQ96S44 253 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 PRRT1Q99946 306 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 SRD5A3Q9H8P0 318 aa7.79□□□□□ -1.16
VPS4B-207ENST00000591519 TEX13DA0A0J9YY54 714 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 C3orf85A0A1B0GTC6 90 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 ZNF320A2RRD8 509 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 SNAPC5O75971 98 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 IGKV1-39P01597 117 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 IGHV3-23P01764 117 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 IGKV1D-39P04432 117 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 PTBP1P26599 531 aaKnown RBP eCLIP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 ELLP55199 621 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 RND3P61587 244 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 IZUMO4Q1ZYL8 232 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 TRIM16LQ309B1 348 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 ANKRD55Q3KP44 614 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 H2BFWTQ7Z2G1 175 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 CADM3Q8N126 398 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 ZNF486Q96H40 463 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 FAM110AQ9BQ89 295 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 RTBDNQ9BSG5 229 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 COMMD5Q9GZQ3 224 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 SRRQ9GZT4 340 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 WFDC10AQ9H1F0 79 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 MRPL27Q9P0M9 148 aaKnown RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 MLXQ9UH92 298 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 SCP2D1Q9UJQ7 156 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 OR51B2Q9Y5P1 312 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 S4R3C0 116 aa7.78□□□□□ -1.16
VPS4B-207ENST00000591519 EPPK1P58107 5090 aaKnown RBP7.78□□□□□ -1.16
VPS4B-207ENST00000591519 TEX50A0A1B0GTY4 177 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 IGLC7A0M8Q6 106 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 JTBO76095 146 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 OR5AC1P0C628 307 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 DEFA4P12838 97 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 AKR1C4P17516 323 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 FAUP35544 74 aaKnown RBP7.77□□□□□ -1.17
VPS4B-207ENST00000591519 AKR1C2P52895 323 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 AP3S2P59780 193 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 BAK1Q16611 211 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 CNPY1Q3B7I2 92 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 TM4SF20Q53R12 229 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 TRIQKQ629K1 86 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 UNQ9165/PRO28630Q6UXU0 137 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 OR10W1Q8NGF6 305 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 RNASE11Q8TAA1 199 aaKnown RBP7.77□□□□□ -1.17
VPS4B-207ENST00000591519 ZNF502Q8TBZ5 544 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 CACNG8Q8WXS5 425 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 ATP6V0BQ99437 205 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 OVOL2Q9BRP0 275 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 ZNF436Q9C0F3 470 aaPredicted RBP7.77□□□□□ -1.17
VPS4B-207ENST00000591519 C5orf66Q9H5L9 145 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 THYN1Q9P016 225 aa7.77□□□□□ -1.17
VPS4B-207ENST00000591519 LOC102724200A0A096LPH7 203 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-207ENST00000591519 MFSD2BA6NFX1 497 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 TRAPPC2P0DI81 140 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 TRAPPC2BP0DI82 140 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 ETV6P41212 452 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 SPINK9Q5DT21 86 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 THOC7Q6I9Y2 204 aaKnown RBP7.76□□□□□ -1.17
VPS4B-207ENST00000591519 HSD17B13Q7Z5P4 300 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-207ENST00000591519 TMED4Q7Z7H5 227 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 OR52B4Q8NGK2 314 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 OR1L8Q8NGR8 309 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 OR4A16Q8NH70 328 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 VN1R17PQ8TDU5 208 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 SDHCQ99643 169 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-207ENST00000591519 GGTLC1Q9BX51 225 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 NAA60Q9H7X0 242 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 GPR132Q9UNW8 380 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 UFC1Q9Y3C8 167 aa7.76□□□□□ -1.17
VPS4B-207ENST00000591519 CRYM-AS1A6NIL9 109 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 IGKV1-5P01602 117 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 OR13C7P0DN81 318 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 CCR6P51684 374 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 SURF2Q15527 256 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-207ENST00000591519 PLET1Q6UQ28 207 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 BTNL8Q6UX41 500 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 GDPD1Q8N9F7 314 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 TMEM230Q96A57 120 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 SCGB3A2Q96PL1 93 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 QTRT1Q9BXR0 403 aaKnown RBP7.75□□□□□ -1.17
VPS4B-207ENST00000591519 KRTAP4-2Q9BYR5 136 aa7.75□□□□□ -1.17
VPS4B-207ENST00000591519 FAM212BQ9NTI7 297 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-207ENST00000591519 BIRC6Q9NR09 4857 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 IGHV3-21A0A0B4J1V1 117 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 C15orf61A6NNL5 157 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 TSPAN4O14817 238 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 CYB5BO43169 146 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 SCAF4O95104 1147 aaKnown RBP7.74□□□□□ -1.17
VPS4B-207ENST00000591519 NXPH3O95157 252 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 UCP1P25874 307 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 GPR183P32249 361 aa7.74□□□□□ -1.17
VPS4B-207ENST00000591519 WT1-ASQ06250 92 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms