RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 PALMDQ9NP74 551 aa17.85■□□□□ 0.45
LSM7-206ENST00000591515 GAR1Q9NY12 217 aaKnown RBP17.85■□□□□ 0.45
LSM7-206ENST00000591515 IGLV11-55A0A075B6I3 123 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 CEBPZOSA8MTT3 80 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 HSPB1P04792 205 aaKnown RBP17.84■□□□□ 0.45
LSM7-206ENST00000591515 HOXB5P09067 269 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 EXOSC2Q13868 293 aaKnown RBP17.84■□□□□ 0.45
LSM7-206ENST00000591515 C15orf32Q32M92 178 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 ZNF114Q8NC26 417 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 MITD1Q8WV92 249 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 RAX2Q96IS3 184 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 P2RX4Q99571 388 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 HIPK2Q9H2X6 1198 aa17.84■□□□□ 0.45
LSM7-206ENST00000591515 LINC01619G3V211 115 aa17.83■□□□□ 0.44
LSM7-206ENST00000591515 ZP3P21754 424 aa17.83■□□□□ 0.44
LSM7-206ENST00000591515 ZNF343Q6P1L6 599 aa17.83■□□□□ 0.44
LSM7-206ENST00000591515 NRARPQ7Z6K4 114 aa17.83■□□□□ 0.44
LSM7-206ENST00000591515 ZNF431Q8TF32 576 aaPredicted RBP17.83■□□□□ 0.44
LSM7-206ENST00000591515 FANCD2OSQ96PS1 177 aa17.83■□□□□ 0.44
LSM7-206ENST00000591515 PEF1Q9UBV8 284 aaKnown RBP17.83■□□□□ 0.44
LSM7-206ENST00000591515 FAM90A26D6RGX4 464 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 CORTO00230 105 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 PRAF2O60831 178 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 MED6O75586 246 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 IL5P05113 134 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 DEFB136Q30KP8 78 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 GGNBP1Q5YKI7 109 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 NOXA1Q86UR1 476 aa17.82■□□□□ 0.44
LSM7-206ENST00000591515 MCRIP2Q9BUT9 160 aaKnown RBP17.82■□□□□ 0.44
LSM7-206ENST00000591515 HEYLQ9NQ87 328 aaPredicted RBP17.82■□□□□ 0.44
LSM7-206ENST00000591515 TRBV7-1A0A0A6YYK4 115 aa17.81■□□□□ 0.44
LSM7-206ENST00000591515 FHL3Q13643 280 aa17.81■□□□□ 0.44
LSM7-206ENST00000591515 SPINK9Q5DT21 86 aa17.81■□□□□ 0.44
LSM7-206ENST00000591515 MUC7Q8TAX7 377 aa17.81■□□□□ 0.44
LSM7-206ENST00000591515 VN1R17PQ8TDU5 208 aa17.81■□□□□ 0.44
LSM7-206ENST00000591515 HSPB7Q9UBY9 170 aa17.81■□□□□ 0.44
LSM7-206ENST00000591515 INMT-MINDY4F8WBC2 141 aa17.8■□□□□ 0.44
LSM7-206ENST00000591515 NDUFB8O95169 186 aa17.8■□□□□ 0.44
LSM7-206ENST00000591515 LY86O95711 162 aa17.8■□□□□ 0.44
LSM7-206ENST00000591515 HTR2BP41595 481 aa17.8■□□□□ 0.44
LSM7-206ENST00000591515 TNFRSF9Q07011 255 aa17.8■□□□□ 0.44
LSM7-206ENST00000591515 C19orf35Q6ZS72 473 aa17.8■□□□□ 0.44
LSM7-206ENST00000591515 LSM4Q9Y4Z0 139 aaKnown RBP17.8■□□□□ 0.44
LSM7-206ENST00000591515 ANKRD34BA5PLL1 514 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 PTTG1O95997 202 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 TATDN3Q17R31 274 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 C12orf45Q8N5I9 185 aaPredicted RBP17.79■□□□□ 0.44
LSM7-206ENST00000591515 OR52B4Q8NGK2 314 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 DUX3Q96PT4 197 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 ATP6V0BQ99437 205 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 ASCL2Q99929 193 aa17.79■□□□□ 0.44
LSM7-206ENST00000591515 IGHV4OR15-8A0A075B7B6 117 aa17.78■□□□□ 0.44
LSM7-206ENST00000591515 A0A087WW49 117 aa17.78■□□□□ 0.44
LSM7-206ENST00000591515 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.78■□□□□ 0.44
LSM7-206ENST00000591515 ATP5IP56385 69 aaPredicted RBP17.78■□□□□ 0.44
LSM7-206ENST00000591515 DEFA5Q01523 94 aa17.78■□□□□ 0.44
LSM7-206ENST00000591515 MISP3Q96FF7 219 aa17.78■□□□□ 0.44
LSM7-206ENST00000591515 SEC22CQ9BRL7 303 aa17.78■□□□□ 0.44
LSM7-206ENST00000591515 LCE6AA0A183 80 aa17.77■□□□□ 0.44
LSM7-206ENST00000591515 PITX3O75364 302 aa17.77■□□□□ 0.44
LSM7-206ENST00000591515 ADAP1O75689 374 aa17.77■□□□□ 0.44
LSM7-206ENST00000591515 UXS1Q8NBZ7 420 aa17.77■□□□□ 0.44
LSM7-206ENST00000591515 DTD1Q8TEA8 209 aa17.77■□□□□ 0.44
LSM7-206ENST00000591515 CIB3Q96Q77 187 aaPredicted RBP17.77■□□□□ 0.44
LSM7-206ENST00000591515 MARVELD1Q9BSK0 173 aa17.77■□□□□ 0.44
LSM7-206ENST00000591515 STARD9Q9P2P6 4700 aa17.77■□□□□ 0.43
LSM7-206ENST00000591515 SNRPGP15A8MWD9 76 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 NXPH3O95157 252 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 RPEL1Q2QD12 228 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 SLC24A4Q8NFF2 622 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 KRTAP17-1Q9BYP8 105 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 U3KQ87 197 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 CSMD3Q7Z407 3707 aa17.76■□□□□ 0.43
LSM7-206ENST00000591515 WRBO00258 174 aa17.75■□□□□ 0.43
LSM7-206ENST00000591515 GGCTO75223 188 aaKnown RBP17.75■□□□□ 0.43
LSM7-206ENST00000591515 RPP30P78346 268 aaKnown RBP17.75■□□□□ 0.43
LSM7-206ENST00000591515 RBKSQ9H477 322 aa17.75■□□□□ 0.43
LSM7-206ENST00000591515 C21orf62Q9NYP8 219 aa17.75■□□□□ 0.43
LSM7-206ENST00000591515 RPS10-NUDT3A0A1W2PQS6 291 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 OVOL1O14753 267 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 SCGB2A1O75556 95 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 IFNA10P01566 189 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 RNASE2P10153 161 aaKnown RBP17.74■□□□□ 0.43
LSM7-206ENST00000591515 ARL3P36405 182 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 IAH1Q2TAA2 248 aaPredicted RBP17.74■□□□□ 0.43
LSM7-206ENST00000591515 C2orf83Q53S99 150 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 CLEC19AQ6UXS0 136 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 ZNF502Q8TBZ5 544 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 PRR25Q96S07 402 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 ZMAT5Q9UDW3 170 aaKnown RBP17.74■□□□□ 0.43
LSM7-206ENST00000591515 DMRT1Q9Y5R6 373 aa17.74■□□□□ 0.43
LSM7-206ENST00000591515 MFSD2BA6NFX1 497 aa17.73■□□□□ 0.43
LSM7-206ENST00000591515 NPY1RP25929 384 aa17.73■□□□□ 0.43
LSM7-206ENST00000591515 NKX2-1P43699 371 aaPredicted RBP17.73■□□□□ 0.43
LSM7-206ENST00000591515 MFAP2P55001 183 aa17.73■□□□□ 0.43
LSM7-206ENST00000591515 MFAP4P55083 255 aa17.73■□□□□ 0.43
LSM7-206ENST00000591515 BSXQ3C1V8 233 aa17.73■□□□□ 0.43
LSM7-206ENST00000591515 RNASEH2CQ8TDP1 164 aaKnown RBP17.73■□□□□ 0.43
LSM7-206ENST00000591515 PINX1Q96BK5 328 aaKnown RBP17.73■□□□□ 0.43
LSM7-206ENST00000591515 TXN2Q99757 166 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms