RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 OR11H1Q8NG94 326 aa16.53■□□□□ 0.24
R3HDM4-206ENST00000590454 RCC1LQ96I51 464 aaKnown RBP16.53■□□□□ 0.24
R3HDM4-206ENST00000590454 B9D2Q9BPU9 175 aa16.53■□□□□ 0.24
R3HDM4-206ENST00000590454 IFNA21P01568 189 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 HIST1H1BP16401 226 aaKnown RBP16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 KRTAP10-11P60412 298 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 EXOSC2Q13868 293 aaKnown RBP16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 ZNF343Q6P1L6 599 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 OR1N2Q8NGR9 330 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 OR1P1Q8NH06 330 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 MAGT1Q9H0U3 335 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 ENY2Q9NPA8 101 aa16.52■□□□□ 0.24
R3HDM4-206ENST00000590454 TENM3Q9P273 2699 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 PRAF2O60831 178 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 PF4P02776 101 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 BSXQ3C1V8 233 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 MRPL41Q8IXM3 137 aaKnown RBP16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 OR4D5Q8NGN0 318 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 TMEM170AQ8WVE7 144 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 CCDC140Q96MF4 163 aa16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 GPN1Q9HCN4 374 aaPredicted RBP16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 HEYLQ9NQ87 328 aaPredicted RBP16.51■□□□□ 0.23
R3HDM4-206ENST00000590454 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 K7EIM0 57 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 SNCAP37840 140 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 MYCNOSP40205 109 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 FHL3Q13643 280 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 LINC00482Q8N8I6 264 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 ZBTB8BQ8NAP8 495 aaPredicted RBP16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 DTD1Q8TEA8 209 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 MISP3Q96FF7 219 aa16.5■□□□□ 0.23
R3HDM4-206ENST00000590454 COL7A1Q02388 2944 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 FAM25EA8MYX2 175 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 IGHV3-48P01763 117 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 IAPPP10997 89 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 TATDN3Q17R31 274 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 RGS21Q2M5E4 152 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 PVRIGQ6DKI7 326 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 GSKIPQ9P0R6 139 aa16.49■□□□□ 0.23
R3HDM4-206ENST00000590454 PPP5D1E7EU14 171 aa16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 HSPB1P04792 205 aaKnown RBP16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 SLURP1P55000 103 aa16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 ID3Q02535 119 aa16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 ZNF616Q08AN1 781 aa16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 EGFEM1PQ0D2K5 195 aa16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 PEF1Q9UBV8 284 aaKnown RBP16.48■□□□□ 0.23
R3HDM4-206ENST00000590454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 C7orf66A4D0T2 115 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 C5orf51A6NDU8 294 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 FAM90A26D6RGX4 464 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 LINC01619G3V211 115 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 I3L2K1 104 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 SIX6O95475 246 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 POLR2GP62487 172 aaKnown RBP eCLIP16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 CLEC19AQ6UXS0 136 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 OR1L6Q8NGR2 347 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 ZNF502Q8TBZ5 544 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 SCARB1Q8WTV0 552 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 EEF1AKMT3Q96AZ1 226 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 PINX1Q96BK5 328 aaKnown RBP16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 HIPK2Q9H2X6 1198 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 CACFD1Q9UGQ2 172 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 ALG5Q9Y673 324 aa16.47■□□□□ 0.23
R3HDM4-206ENST00000590454 BMPR1BO00238 502 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 WRBO00258 174 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 SYNGR2O43760 224 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 SCGB1D2O95969 90 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 MT-CO2P00403 227 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 HTR2BP41595 481 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 NKX2-1P43699 371 aaPredicted RBP16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 OXA1LQ15070 435 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 MLANAQ16655 118 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 SLC24A4Q8NFF2 622 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 DPF1Q92782 380 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 RANGRFQ9HD47 186 aaPredicted RBP16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 ZC4H2Q9NQZ6 224 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 THYN1Q9P016 225 aa16.46■□□□□ 0.23
R3HDM4-206ENST00000590454 F8W735 103 aaPredicted RBP16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 GOSR2O14653 212 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 CYB5BO43169 146 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 HOXD3P31249 432 aaPredicted RBP16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 SUB1P53999 127 aaKnown RBP eCLIP16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 C2orf83Q53S99 150 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 VN1R17PQ8TDU5 208 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 DLX4Q92988 240 aaPredicted RBP16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 WDR89Q96FK6 387 aaPredicted RBP16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 CXorf58Q96LI9 332 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 GPR61Q9BZJ8 451 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 FNDC4Q9H6D8 234 aaPredicted RBP16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 DNAH9Q9NYC9 4486 aa16.45■□□□□ 0.22
R3HDM4-206ENST00000590454 TMEM50AO95807 157 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 IFNA10P01566 189 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 MBPP02686 304 aaPredicted RBP16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 CLEC3BP05452 202 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 NPY1RP25929 384 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 DCUN1D4Q92564 292 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 C2orf50Q96LR7 162 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 C21orf62Q9NYP8 219 aa16.44■□□□□ 0.22
R3HDM4-206ENST00000590454 MRPL36Q9P0J6 103 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 255.8 ms