RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■□□□ 11.8
DDX39A-211ENST00000590239 OR2F1Q13607 317 aa11.88□□□□□ -0.51
DDX39A-211ENST00000590239 ETV3LQ6ZN32 361 aa11.88□□□□□ -0.51
DDX39A-211ENST00000590239 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
DDX39A-211ENST00000590239 PAIP2BQ9ULR5 123 aaKnown RBP11.88□□□□□ -0.51
DDX39A-211ENST00000590239 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 RNF222A6NCQ9 220 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 PMS2P5A8MQ11 134 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 SOX15O60248 233 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 CST7O76096 145 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 IGLV1-40P01703 118 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 IGHG4P01861 327 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 HBG1P69891 147 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 HBG2P69892 147 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 SLC35B1P78383 322 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
DDX39A-211ENST00000590239 ZNF345Q14585 488 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 ZC4H2Q9NQZ6 224 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 THYN1Q9P016 225 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 HSPB11Q9Y547 144 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
DDX39A-211ENST00000590239 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 A0A0D9SG52 128 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 HNRNPCP07910 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDX39A-211ENST00000590239 S100A11P31949 105 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-211ENST00000590239 EIF2B2P49770 351 aaKnown RBP11.86□□□□□ -0.51
DDX39A-211ENST00000590239 NHLH2Q02577 135 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 HAPLN4Q86UW8 402 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 CACNG8Q8WXS5 425 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 PINX1Q96BK5 328 aaKnown RBP11.86□□□□□ -0.51
DDX39A-211ENST00000590239 MISP3Q96FF7 219 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
DDX39A-211ENST00000590239 RPS10-NUDT3A0A1W2PQS6 291 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 PRH1P02810 166 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 CXCL2P19875 107 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 OR8G2PQ6IF36 304 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-211ENST00000590239 COMMD1Q8N668 190 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 OR1S2Q8NGQ3 325 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 LINC01006Q8NI28 216 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 SLA2Q9H6Q3 261 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 ZNF355PQ9NSJ1 428 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
DDX39A-211ENST00000590239 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 FNDC10F2Z333 226 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 AP2S1P53680 142 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-211ENST00000590239 DLK1P80370 383 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 CD69Q07108 199 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 FOXE3Q13461 319 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 ATP6V1FQ16864 119 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 LGALSLQ3ZCW2 172 aaPredicted RBP11.84□□□□□ -0.51
DDX39A-211ENST00000590239 ETFRF1Q6IPR1 90 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 TEX38Q6PEX7 206 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 TMEM217Q8N7C4 229 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX39A-211ENST00000590239 FBXL7Q9UJT9 491 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 COL6A5A8TX70 2615 aa11.84□□□□□ -0.51
DDX39A-211ENST00000590239 A0A1B0GUS0 222 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 I3L2K1 104 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 K7EIM0 57 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 TAAR5O14804 337 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 OR2J3O76001 311 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 MT-CO2P00403 227 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 TRGV3P03979 118 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 ELANEP08246 267 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 PF4V1P10720 104 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 PSMB8P28062 276 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 OPRK1P41145 380 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 RHOGP84095 191 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
DDX39A-211ENST00000590239 ZNF329Q86UD4 541 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 OR5C1Q8NGR4 320 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 VN1R17PQ8TDU5 208 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-211ENST00000590239 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
DDX39A-211ENST00000590239 FNDC4Q9H6D8 234 aaPredicted RBP11.83□□□□□ -0.52
DDX39A-211ENST00000590239 ATRQ13535 2644 aa11.82□□□□□ -0.52
DDX39A-211ENST00000590239 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
DDX39A-211ENST00000590239 DFFBO76075 338 aa11.82□□□□□ -0.52
DDX39A-211ENST00000590239 NDUFB8O95169 186 aa11.82□□□□□ -0.52
DDX39A-211ENST00000590239 C4BPBP20851 252 aa11.82□□□□□ -0.52
DDX39A-211ENST00000590239 NKX2-5P52952 324 aaPredicted RBP11.82□□□□□ -0.52
DDX39A-211ENST00000590239 TPPP2P59282 170 aa11.82□□□□□ -0.52
DDX39A-211ENST00000590239 VWC2Q2TAL6 325 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms